Mediterraneibacter gnavus: RGna_06315
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Entry
RGna_06315 CDS
T06719
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00300
Lysine biosynthesis
rgn00550
Peptidoglycan biosynthesis
rgn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RGna_06315
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RGna_06315
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
RGna_06315
Enzymes [BR:
rgn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
RGna_06315
Peptidoglycan biosynthesis and degradation proteins [BR:
rgn01011
]
Precursor biosynthesis
Amino acid ligase
RGna_06315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
LpxD
Motif
Other DBs
NCBI-ProteinID:
QHB23132
LinkDB
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Position
complement(1266226..1267701)
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AA seq
491 aa
AA seq
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MILKQLLERLEYEVVQGSDKIEITTLINDSRKVEEGSVFVCISGAVSDGHQYVADVAKKG
AKAVIVQQDVEAPAGMTVIRVEDTRYALALASAAYFGYPAEKLHIIGITGTKGKTTTTYM
IKSILEGVGHKVGLIGTIEAIIGEEVIPAANTTPESYTIHQYFAKMVEAGCDSVVMEVSS
QGLMLHRTAGIPFEIGIFTNLGKDHIGPNEHKDFEDYKRCKGLLFQQCRVGIANADDRYF
KDVFKNATCKVETFGFCKEADLRAEDVNLVSRPGYLGVAYHVAGVMDFDVEIDVPGTFSV
YNSLTAIAVCRHFDVPKEHIQAALKKAKVKGRIEMVKVSDEFTLMIDYAHNAMSLESLLT
TLKEYHPKRLVCLFGCGGNRSRDRRFEMGEVSGRLADLTIITSDNPRFEEPQAIIDDIKV
GIEKTDGAYVEIIDRKEAIRYAITHGQTGEVIVLAGKGHEDYQEIEGVKHPMDERVLIAE
ILTELEEEQKK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgattttaaaacagttattggaacgtttggaatatgaagtagtacaggggagtgacaag
atcgaaattacaacattgatcaatgactcccgtaaagtagaagaaggatctgtgtttgta
tgcatcagcggcgctgtctcagacggacatcagtatgtagctgatgtggcaaaaaaagga
gcaaaagccgtgatcgtgcagcaggatgtagaggcaccggcgggaatgactgtgatccgt
gtggaagacacaaggtacgcactcgcacttgcttctgccgcttatttcggctatccggca
gagaagctgcacattattggaattacagggacaaaaggaaagacgaccacgacctatatg
atcaaatccattctggagggagtcggacataaagtaggactgatcggaaccattgaggcc
attatcggagaggaagtgattccggcagcgaatacgacaccggaatcttataccattcat
cagtattttgctaaaatggtggaagccggctgtgacagcgtggtcatggaggtgtcatcc
cagggactgatgctgcaccggacagcagggattccgtttgaaatcgggattttcacaaat
cttggaaaagatcatatcggaccgaatgaacacaaggattttgaagattataaaagatgc
aaaggcttactgttccagcagtgcagggttggaattgccaatgcagatgacaggtatttt
aaggatgtatttaaaaatgctacatgtaaagtggagacatttggtttctgcaaagaggcg
gatctgcgggctgaagatgtaaatctggtgtccagaccgggatatctcggtgtggcatat
catgtggcaggagtcatggattttgatgtggagattgatgtaccgggaacattcagtgtt
tacaattcactgacagcgattgcagtgtgcagacactttgatgtgccgaaagagcacatt
caggcggctttgaaaaaggcgaaggttaagggcagaatcgagatggtgaaagtgtctgat
gaattcactctgatgatcgactatgcacacaatgccatgagtctggagagtcttttgacc
acgttaaaagaatatcatccaaaacgtctggtatgtctgttcggatgcggtggaaaccgt
tccagagaccgacgctttgagatgggagaagtgtccggccgtctggcagatctgacgatc
atcacttccgataatccgagatttgaagagccgcaggcgatcatcgatgacatcaaagtg
ggaatcgaaaagacggacggagcgtatgtggaaatcatagacaggaaagaagccatccgt
tatgcgatcacacacgggcagaccggggaggtgatcgtgcttgcaggaaaagggcatgaa
gattaccaggagatcgaaggtgtgaagcatccgatggatgagcgggttctgattgcggag
atcttaacagaactggaagaggaacagaaaaaataa
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