Mediterraneibacter gnavus: RGna_07950
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Entry
RGna_07950 CDS
T06719
Name
(GenBank) hypothetical protein
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn00052
Galactose metabolism
rgn00511
Other glycan degradation
rgn00600
Sphingolipid metabolism
rgn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
RGna_07950
09103 Lipid metabolism
00600 Sphingolipid metabolism
RGna_07950
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RGna_07950
Enzymes [BR:
rgn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
RGna_07950
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Glyco_hydro_2
Glyco_hydro_2_N
BetaGal_ABD2
Motif
Other DBs
NCBI-ProteinID:
QHB23427
LinkDB
All DBs
Position
complement(1557594..1559837)
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AA seq
747 aa
AA seq
DB search
MRRKIEINENWFFTKERPNLTAPDFSAMQEITLPHTWNAEDGADGDDYYDRRECWYVRKL
ERPQGDEIYLEVPAASQTAHVYLNGAEIGHHIGGFSLFRIRLTERLEEKENILAIAVDNS
ESQDTYPQFADFTFFGGLYRGVNLLVVPERHFELEEYGGPGIYVTSHLNEDGKAEVLVQG
KVSGGQSEAYKVQIRNGEGEIILEANTEKPEKVFFIDNPRVWNGKKDPYLYTAKMIMEGS
GDEVSTRFGIREFYVDAETGFFLNQESYPLRGVSRHQDRQGKGWAISEEDQREDAMLIHE
IGATAVRLAHYQHAQSFYDFCDELGMVVWAEIPFISRFINTKEAKEDTVRQMRELIMQNY
NHPSICFWGISNEITMGEESDELVENQRILQKLCHKLDPSRKTVLANLTTVESQSEQNKI
TDLSAYNVYMGWYAGKVEDCGAWMDSLHKENSDMCMGISEYGADTNVQYHSDAPKRQDYT
EEYQSYYHEKMLQAIQERPYLWCSFVWNMFDFAADKRKEGGTQGRNTKGLVTYDRKIKKD
AFYLYKAYWTEKPFVHICSKRFQKRPGDTTTIKVYATGIEKAELWMDGKRIQEQKGTYCF
LFEGIKLTQNHQITIYGYCGDEKVCEDEAAFTHTDGLEAEYILESGENDGVNWFLDEYGE
KKKLEATQGFLSVYDEIGTILDTEKGNEILNGLFISFGEGGKALLTESVQNSIRSLTFVE
LAKMIGPAITPEMLNMLNEQLRHVKNS
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgagacgaaaaatagaaattaatgaaaattggttttttacaaaagaaagaccaaatctg
acagcacccgatttttcggcaatgcaggagataacactgcctcatacgtggaatgcagaa
gacggggcagatggggacgattattatgacagaagagaatgctggtatgttcgaaaactg
gagcgtcctcagggcgatgaaatttatttggaggttccggctgcaagtcagactgcacat
gtgtatctcaatggagcagagatcgggcatcatatcggaggattttcgctgtttcggatt
cgtttgacggaaagattggaagaaaaggagaatattcttgcaattgcagtagataattcg
gaaagtcaggatacatatccgcaatttgcggactttacctttttcggtggtttgtatcga
ggtgtaaatttactggttgtacctgaacggcattttgaattggaagaatatggaggtccc
gggatttatgtgacttcacacctaaacgaagatggaaaagcagaagttctggtgcaggga
aaggtatcaggcgggcaaagtgaagcatataaggtgcagatacggaatggagaaggggag
attattctggaagcaaatacagagaaacctgaaaaagtgtttttcatagataatccaaga
gtatggaatgggaaaaaagatccctatttatatacagcgaaaatgatcatggaaggttcc
ggtgatgaggtaagtacccgatttggtattcgggaattttatgtggatgctgaaacagga
ttcttcctgaatcaggagagttatcctttgcgcggagtttccagacatcaggaccgacaa
ggaaaaggatgggcaatcagcgaggaagatcaaagagaagatgcgatgttgattcatgaa
ataggagctacagcagtaagactggcacattatcagcatgcacagagtttttatgatttt
tgtgatgagttaggtatggtagtttgggcggaaattccatttatttctcgttttataaat
acgaaagaagcaaaagaggatactgtacgacagatgcgggaattgattatgcagaattat
aatcatccaagtatttgcttttgggggatcagtaatgaaatcacgatgggggaagagtct
gatgaacttgtggaaaatcagaggattctgcagaaattatgccacaagctggacccgtcc
cgaaaaacagtgcttgcaaatctgacaactgtggagagccaaagtgaacagaacaagatt
acagatttatcggcctataatgtttatatgggatggtatgcaggaaaagtagaggactgc
ggagcgtggatggactctctccataaagaaaattctgatatgtgcatgggaatttcggaa
tatggcgcagataccaatgttcaatatcattcggatgctccgaaacgtcaggattatacg
gaagagtaccagtcttattatcacgaaaaaatgcttcaggcaatacaggaacgaccgtat
ctctggtgcagctttgtgtggaatatgttcgattttgcggcagataagagaaaagaaggt
ggcacacaagggcgtaatacaaaaggtctggttacatatgatcggaaaattaaaaaggat
gcattttatctttataaagcatattggacagaaaaaccgtttgtgcacatctgttcaaag
cgttttcaaaaaagaccgggagacactacaacaataaaagtatacgccacaggaatcgaa
aaggcggaactttggatggatggaaaacggatccaagaacaaaaagggacatattgtttc
ctgtttgaaggtattaaattaactcaaaatcaccaaattacaatttatggttattgcgga
gatgagaaggtttgcgaagacgaggccgcttttactcatacagatggattggaggcagag
tatattctggagtccggcgaaaatgacggagtcaactggttcctggatgagtatggagaa
aaaaagaagcttgaagcaacacagggctttctgtctgtatatgatgagatagggacaata
ctggatacagagaaaggcaatgaaattctgaatgggttgtttatctcgtttggagaaggt
ggtaaagcgttactgactgagagtgtgcagaattcaattcgttcgttgacattcgtagag
cttgcgaaaatgatcggaccagcaattacacctgaaatgttaaatatgctcaatgagcaa
ttaaggcatgtaaaaaattcttaa
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