Mediterraneibacter gnavus: RGna_11560
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Entry
RGna_11560 CDS
T06719
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
rgn
Mediterraneibacter gnavus
Pathway
rgn03030
DNA replication
rgn03430
Mismatch repair
rgn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rgn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RGna_11560
03430 Mismatch repair
RGna_11560
03440 Homologous recombination
RGna_11560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rgn03032
]
RGna_11560
03400 DNA repair and recombination proteins [BR:
rgn03400
]
RGna_11560
Enzymes [BR:
rgn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RGna_11560
DNA replication proteins [BR:
rgn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RGna_11560
DNA repair and recombination proteins [BR:
rgn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RGna_11560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
QHB24068
LinkDB
All DBs
Position
2318122..2319231
Genome browser
AA seq
369 aa
AA seq
DB search
MRIVCTKSNLVKGVSIVSKAVPSKTTMPILECILVDASTDVIKLTANDMELGIETRIEGD
ILERGIIALNAKIFSEIVRKLPDSDVVIETTSDNQTLITCEKAKFNIAAQSGEDFSYLPV
IEKEDYITVSEFTLKEVIRQTIFSIADNDTNKMMTGELFEIEGNILKVVSLDGHRISIRK
IELKENYAQKKVIVPGKTLQEISKIIGGEAEALVDISFTKNHIVFEFDKTVVVSRLIEGE
YFKIDQMLSSDYETKVRIHKKELLDCIDRATLLIKEGDKKPIIIDIKDGTMELKIKSQIG
SMDETIFITKEGKDLLIGFNPKFLIDALRVIDDEEVDLYFMNAKAPCFIKDENQSYIYLI
LPVNFNAVA
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagaatcgtatgtacgaaatccaatcttgtaaaaggagtcagtattgtttctaaagct
gttccttctaaaacaacaatgcctatcttagaatgtattttagttgacgcatcgacagat
gttattaagttgacagcaaatgatatggaacttggaattgaaacccgaattgaaggtgat
attttagaaagaggtatcatcgcattaaatgctaagattttttcggaaattgtaagaaag
cttccggacagtgatgttgtaatcgaaacaacatctgacaatcagactctgatcacctgt
gaaaaagcaaaattcaatattgcagcacagtccggagaagatttttcataccttcctgta
atagagaaagaagattacattactgtctcagaattcacattaaaagaagtgattcgtcag
acaattttctccatcgcagataatgatacaaataagatgatgacgggtgaattgtttgaa
attgaaggcaacatactgaaagttgtctcactagatggtcacagaatctcaattcgtaag
atagaattaaaagaaaattacgctcagaagaaggtcattgtccctggaaaaacgcttcag
gaaatcagcaagatcattggtggagaggcggaagcactggttgatatttctttcacaaag
aatcatatcgtatttgaatttgacaaaacagttgttgtatctcgtttgatcgaaggagaa
tattttaaaatcgatcagatgttatccagtgactatgaaacaaaagtcagaatccataaa
aaagaacttctagactgtattgaccgtgccaccctgcttatcaaagagggagacaaaaaa
ccgatcattatcgatatcaaagacggaacgatggaattaaagatcaaatcccagatcggt
tctatggatgaaactatttttattaccaaagaaggaaaagacttgctcattggatttaac
ccgaaattcctgattgatgctcttcgtgtcattgacgatgaggaagtggatctgtatttt
atgaacgcgaaagctccgtgtttcatcaaagatgagaatcagagctatatttatctgatc
cttccggtaaattttaacgcagttgcgtag
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