Rhizobium grahamii: FZ934_10095
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Entry
FZ934_10095 CDS
T06285
Name
(GenBank) UdgX family uracil-DNA binding protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rgr
Rhizobium grahamii
Pathway
rgr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rgr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FZ934_10095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rgr03400
]
FZ934_10095
Enzymes [BR:
rgr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FZ934_10095
DNA repair and recombination proteins [BR:
rgr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FZ934_10095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4130
UDG
Motif
Other DBs
NCBI-ProteinID:
QFY60738
UniProt:
A0A5Q0C4A1
LinkDB
All DBs
Position
complement(2060960..2062453)
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AA seq
497 aa
AA seq
DB search
MRHITLRGRGDLEEWRVAARALAIAGVASEEVEWHAEAEDGGLFRHDGEMPLPASSPDAA
PLTVPPAFIELANAVICHSDPARFMLLYRLLVRLQADRRLLEQPSDEDVVRARLMEKSVR
RDAHKMTAFVRFKEVGSGISVNGRRKFLAWFEPDHYIVGRKASFFQRRFNDMDWIILTPK
GSAGWDGKTLTIGDDSCEKPDLSDAADELWRTYYANIFNPARLKVKAMQAEMPKKYWKNL
PEADLIPGLIANAESQVLAMAKREATRPLPFHERLQEAARNAPGLPVAEAGTWESLREAA
ATCTRCPLHGPATQTVFGEGPRDAVAVFVGEQPGDQEDLAGRPFVGPAGSVFDQALVHAG
IARSTIYVTNAVKHFKYEPRGKRRIHQRPNMGEVKYCRWWLEQELELIAPKLVVAMGATA
VASLADGKFRFSDIRGEALATPDGRVLFTTVHPSYLLRLPDPAKKAEETDRFLQDMLKIQ
RLIESISQGDSIASIAR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcgacacataacgttgcgcgggcgaggggatctggaggaatggcgggttgcggcccgc
gccttggccatcgccggcgtggcctccgaggaggtcgagtggcacgcggaagcggaggat
ggcgggctttttcgacatgacggcgaaatgccgcttcctgcgtcgtcgccggacgcggcg
ccattgacggtgccgccggcctttatcgaattggccaacgctgtcatctgccatagtgat
ccggcgcgcttcatgttgctttaccggcttctcgttcgcttgcaggccgaccgacggctt
ctggaacagccttcggacgaagacgtggtgcgcgcacgcctgatggagaaaagcgttcgg
cgcgacgcacacaagatgacggcgttcgttcggttcaaggaggtcggcagcgggatttcg
gtgaatggtcggcgcaagtttctcgcctggttcgaaccggaccactacatcgtcggacgc
aaggcctcgttctttcagaggcgcttcaacgatatggactggatcatcctaacaccgaaa
ggctcggcgggctgggatggcaagacgctgacaattggcgatgactcctgcgaaaagcct
gacctttccgatgcagccgatgaactttggcgcacctactacgccaatatcttcaatccg
gcgcgtttgaaggtgaaggcgatgcaggcagagatgccgaagaaatactggaagaatctg
cccgaagcggacctcattcccggtctgatcgcaaatgcagagagccaggtactggcaatg
gcgaagcgggaggcaacccgtccgctgccgttccacgagcgtctgcaggaggcggcccga
aatgcgcccggcttgcctgtggcggaggccggaacatgggagtcgcttcgagaggcagcc
gcgacctgcacccgctgtccgctgcatggcccggcgacacaaacggtgttcggtgagggg
ccgcgcgatgccgtggcggttttcgtcggcgagcaaccgggcgatcaggaagatctggct
ggacgacctttcgtcggcccggcgggctcggtttttgatcaggcattggttcacgcgggc
atcgcgcgatcgacaatctacgtcaccaatgcggtgaaacacttcaagtacgaacctcga
ggcaaacgacgcatccaccagcggccgaacatgggcgaggtgaaatattgtcgttggtgg
ctcgagcaggaactggagctgatcgctccaaagcttgttgtcgcgatgggggcaacagcg
gttgcgtcattggccgacggaaaatttcgtttctcggatatcaggggcgaggcgcttgcg
accccggatggccgcgtgctgtttacgacggtgcatccgtcctatctgctgcgcctgccg
gatcccgccaaaaaagcggaggaaacggatcggttccttcaggatatgctgaaaattcag
aggcttattgaatcgatctcgcaaggagattcaatcgcatcgattgctcgatga
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