Piscinibacter gummiphilus: A4W93_12100
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Entry
A4W93_12100 CDS
T04831
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase (NADP(+))
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
rgu
Piscinibacter gummiphilus
Pathway
rgu00250
Alanine, aspartate and glutamate metabolism
rgu00310
Lysine degradation
rgu00350
Tyrosine metabolism
rgu00650
Butanoate metabolism
rgu00760
Nicotinate and nicotinamide metabolism
rgu01100
Metabolic pathways
rgu01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rgu00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
A4W93_12100 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
A4W93_12100 (gabD)
00310 Lysine degradation
A4W93_12100 (gabD)
00350 Tyrosine metabolism
A4W93_12100 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
A4W93_12100 (gabD)
Enzymes [BR:
rgu01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
A4W93_12100 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
A4W93_12100 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
A4W93_12100 (gabD)
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Motif
Pfam:
Aldedh
Phage_RpbA
Motif
Other DBs
NCBI-ProteinID:
ARN20576
UniProt:
A0A1W6L8M3
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Position
complement(2728252..2729718)
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AA seq
488 aa
AA seq
DB search
MDTRTSPLANLLDPSLLKTDALIGAGWVKGSARFDVTDPATGLKLVDVADLGVAETRDAI
AAAQAALPAWRGRTAKDRGAILTKWFQLMVQHADDLARIMTAEQGKPLAESKGEVVYGAS
FIEWFAEEGKRVYGETIPATDPRKRYLVIKQAMGVCAAITPWNFPIAMITRKVGPALAAG
CPVVVKPAGQTPLSALAIAELGRRAGLPDGVLNVVTAAKSAEIGKVMCESEVVRHLSFTG
STEVGRILAAQCAPTIKKLSLELGGNAPFIVFDDADLDSAVEGALASKYRNGGQTCVCAN
RLYVQDGVYDTFVQKLAAKVQAIKVGNGFEAGVTQGPMIDDNAIAKIERHVADAVSKGAK
VLTGGKRLHDRFFEPTVLTEANADMLCAREETFGPVAPVFRFQTEEEVLRLANDTEFGLA
AYFYSRDIGRVFRVGEGLESGMVGVNTGLISTAEVPFGGVKQSGLGREGSRHGIEDYVEI
KYLCLGDI
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggacacacgcacttccccgctggcgaacctgctcgacccgagcctcctgaagaccgac
gcgctgatcggcgccggctgggtcaagggctcggcccgcttcgacgtcaccgaccccgcc
accggcctgaagctggtcgacgtggccgacctgggcgtcgccgagacccgcgacgccatc
gccgcggcgcaggccgccctgcccgcgtggcgcggccgcacggccaaggaccgcggcgcc
atcctcacgaagtggttccagctgatggtgcagcacgccgacgacctggcccgcatcatg
accgccgagcagggcaagccgctcgccgagtccaagggcgaggtggtgtacggcgcgagc
ttcatcgagtggttcgccgaggaaggcaagcgtgtctacggcgagaccatcccggccacc
gacccgcgcaagcgctacctcgtcatcaagcaggcgatgggcgtgtgcgcggccatcacg
ccctggaacttccccatcgcgatgatcacccgcaaggtgggcccggcactggccgccggc
tgcccggtggtggtcaagcccgcggggcagacgccgctgtcggccctggccatcgccgag
ctgggccgccgcgccgggctgcccgacggggtgctgaacgtggtcaccgccgccaagtcc
gccgagatcggcaaggtgatgtgcgagagcgaggtggtgcgccacctctccttcaccggg
tccaccgaggtgggccgcatcctcgccgcccagtgcgccccgaccatcaagaagctgtcg
ctggaactgggtggcaacgcgccgttcatcgtcttcgacgacgccgacctcgacagcgcc
gtcgagggggcgctcgccagcaagtaccgcaacggcggccagacctgcgtctgcgcgaac
cgcctgtacgtgcaggacggcgtgtacgacaccttcgtgcagaagctcgccgcgaaggtc
caggccatcaaggtgggcaacgggttcgaggccggggtcacccagggcccgatgatcgac
gacaacgccatcgcgaagatcgagcgccacgtggccgacgccgtctccaagggcgcgaag
gtgctcaccggcggcaagcgcctgcacgaccgcttcttcgaacccacggtgctcacggag
gcgaacgccgacatgctgtgcgcccgcgaggagaccttcgggccggtcgccccggtgttc
cggttccagacggaagaggaggttctccggctcgccaacgacaccgagttcggcctcgcc
gcgtacttctacagccgggacatcgggcgggtgttccgcgtgggcgaagggctggagtcc
gggatggtgggggtgaacacggggctgatctcgacggcggaggtgccgttcgggggggtg
aagcagtccggactgggacgcgaaggatctcgccacgggatcgaggactacgtggagatc
aagtacctctgcctgggcgacatctga
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