KEGG   Rhodococcus jostii: RHA1_ro05003
Entry
RHA1_ro05003      CDS       T00382                                 
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
  KO
K01669  deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]
Organism
rha  Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:rha00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rha03400]
    RHA1_ro05003 (phr)
Enzymes [BR:rha01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.99  Other carbon-carbon lyases
    4.1.99.3  deoxyribodipyrimidine photo-lyase
     RHA1_ro05003 (phr)
DNA repair and recombination proteins [BR:rha03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RHA1_ro05003 (phr)
 Prokaryotic type
    RHA1_ro05003 (phr)
SSDB
Motif
Pfam: FAD_binding_7 DNA_photolyase Vir_act_alpha_C
Other DBs
NCBI-ProteinID: ABG96784
UniProt: Q0S6Q2
LinkDB
Position
5281967..5283307
AA seq 446 aa
MDTALVWFRRDLRLGDLPTLHTVSESGARALGLFVLDDRLLTTSGGARRDFLFRSLAALD
DQLDGRLLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAEHVDLVATGSPY
AVAPGRVTKTDGEPYRVFTPYFRQWLEHGWRAPIDTGSATVEWLDPNDVKARRVAIPEPE
SDGCPAGEAAALQRWAEFCDDDLAGYEDARDRPGLDATSRMSVYLKYGNIHPRTMLRDLA
RRRSTSAEQYRRQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGSDAEEAYTAWCEG
RTGFPIVDAGMRQLKAEAWMHNRVRMIVASFFVKDLHLPWWRGARYFMNQLVDGDLANNQ
HGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGIPGKAVHALKDGRPE
DYPPPIVDHAHERQEALARYGEIKAL
NT seq 1341 nt   +upstreamnt  +downstreamnt
atggacaccgcactcgtctggttccggcgcgacctccggctcggtgatctgccgacgctt
cacacggtgtccgagtcgggggcgcgggcgctcgggctgttcgtcctcgacgaccggctg
ctgacaacatcgggcggtgctcgccgggacttcctgttccgcagtctcgccgcattggac
gaccaactcgacggccggttgctggtggtgaagggcgatcccgtcgacgtggttccgagg
gtcgcgaagaaggtatcggccgaagaagtgcacgtgagcgcggactacgggccctacggt
cgcgagcgtgatgccgccgtcgcggagcatgtcgatctggtggccaccggttcgccgtat
gccgtggcgccgggccgggtgacgaagacggacggggagccgtaccgcgtgttcaccccg
tacttccggcagtggctcgaacacgggtggcgcgcgccgatcgacaccgggtctgcgacg
gtggagtggctggacccgaacgacgtgaaggcgcggcgggtggcgatccccgaaccggaa
tccgacgggtgccccgcgggtgaggcggcggcgctgcagcggtgggcggagttctgcgac
gacgacctcgccggctacgaggatgcgcgggatcgtcccggtctcgacgcgacgagccgg
atgtccgtctacctgaagtacggcaacattcatccgcggacgatgctccgcgatctcgcg
cgccgccgcagcacgagcgccgaacagtaccggcggcagctcgcgtggcgggacttctac
gccgacatcctcttccagcgccccgacagcgcccgcgggaactatgaccgtcgcttcgac
cacatccgctacgacagcggttccgacgccgaggaggcgtacacggcgtggtgcgagggc
cgcacggggttcccgatcgtcgacgccgggatgcgtcagctgaaagccgaagcctggatg
cacaatcgggtgcggatgatcgtcgcgtcgttcttcgtcaaggatctgcacctgccgtgg
tggcggggtgcccgctacttcatgaaccagctcgtcgacggggatctcgcgaacaatcag
cacggctggcagtggaccgcgggatcggggacggacgcgtcgccgtacttccgggtgttc
aacccgacgacgcagggggagaagttcgaccccgacggcgagtacgtgcggcggtgggtg
cccgaactgcgcggcatccccggcaaggccgtccacgctctgaaagacggtcgccccgag
gactatccgccaccgatcgtcgaccacgcccacgaacggcaggaggccctcgcccgctac
ggcgagatcaaggccctgtga

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