Rhodococcus jostii: RHA1_ro05003
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Entry
RHA1_ro05003 CDS
T00382
Symbol
phr
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rha
Rhodococcus jostii
Brite
KEGG Orthology (KO) [BR:
rha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rha03400
]
RHA1_ro05003 (phr)
Enzymes [BR:
rha01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
RHA1_ro05003 (phr)
DNA repair and recombination proteins [BR:
rha03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
RHA1_ro05003 (phr)
Prokaryotic type
RHA1_ro05003 (phr)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Vir_act_alpha_C
Motif
Other DBs
NCBI-ProteinID:
ABG96784
UniProt:
Q0S6Q2
LinkDB
All DBs
Position
5281967..5283307
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AA seq
446 aa
AA seq
DB search
MDTALVWFRRDLRLGDLPTLHTVSESGARALGLFVLDDRLLTTSGGARRDFLFRSLAALD
DQLDGRLLVVKGDPVDVVPRVAKKVSAEEVHVSADYGPYGRERDAAVAEHVDLVATGSPY
AVAPGRVTKTDGEPYRVFTPYFRQWLEHGWRAPIDTGSATVEWLDPNDVKARRVAIPEPE
SDGCPAGEAAALQRWAEFCDDDLAGYEDARDRPGLDATSRMSVYLKYGNIHPRTMLRDLA
RRRSTSAEQYRRQLAWRDFYADILFQRPDSARGNYDRRFDHIRYDSGSDAEEAYTAWCEG
RTGFPIVDAGMRQLKAEAWMHNRVRMIVASFFVKDLHLPWWRGARYFMNQLVDGDLANNQ
HGWQWTAGSGTDASPYFRVFNPTTQGEKFDPDGEYVRRWVPELRGIPGKAVHALKDGRPE
DYPPPIVDHAHERQEALARYGEIKAL
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgcactcgtctggttccggcgcgacctccggctcggtgatctgccgacgctt
cacacggtgtccgagtcgggggcgcgggcgctcgggctgttcgtcctcgacgaccggctg
ctgacaacatcgggcggtgctcgccgggacttcctgttccgcagtctcgccgcattggac
gaccaactcgacggccggttgctggtggtgaagggcgatcccgtcgacgtggttccgagg
gtcgcgaagaaggtatcggccgaagaagtgcacgtgagcgcggactacgggccctacggt
cgcgagcgtgatgccgccgtcgcggagcatgtcgatctggtggccaccggttcgccgtat
gccgtggcgccgggccgggtgacgaagacggacggggagccgtaccgcgtgttcaccccg
tacttccggcagtggctcgaacacgggtggcgcgcgccgatcgacaccgggtctgcgacg
gtggagtggctggacccgaacgacgtgaaggcgcggcgggtggcgatccccgaaccggaa
tccgacgggtgccccgcgggtgaggcggcggcgctgcagcggtgggcggagttctgcgac
gacgacctcgccggctacgaggatgcgcgggatcgtcccggtctcgacgcgacgagccgg
atgtccgtctacctgaagtacggcaacattcatccgcggacgatgctccgcgatctcgcg
cgccgccgcagcacgagcgccgaacagtaccggcggcagctcgcgtggcgggacttctac
gccgacatcctcttccagcgccccgacagcgcccgcgggaactatgaccgtcgcttcgac
cacatccgctacgacagcggttccgacgccgaggaggcgtacacggcgtggtgcgagggc
cgcacggggttcccgatcgtcgacgccgggatgcgtcagctgaaagccgaagcctggatg
cacaatcgggtgcggatgatcgtcgcgtcgttcttcgtcaaggatctgcacctgccgtgg
tggcggggtgcccgctacttcatgaaccagctcgtcgacggggatctcgcgaacaatcag
cacggctggcagtggaccgcgggatcggggacggacgcgtcgccgtacttccgggtgttc
aacccgacgacgcagggggagaagttcgaccccgacggcgagtacgtgcggcggtgggtg
cccgaactgcgcggcatccccggcaaggccgtccacgctctgaaagacggtcgccccgag
gactatccgccaccgatcgtcgaccacgcccacgaacggcaggaggccctcgcccgctac
ggcgagatcaaggccctgtga
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