Rhodococcus sp. B7740: NY08_1789
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Entry
NY08_1789 CDS
T03776
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rhb
Rhodococcus sp. B7740
Pathway
rhb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rhb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NY08_1789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhb03400
]
NY08_1789
Enzymes [BR:
rhb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NY08_1789
DNA repair and recombination proteins [BR:
rhb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NY08_1789
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Glyco_transf_5
KorB_C
Exo_endo_phos_2
Peptidase_C48
Motif
Other DBs
NCBI-ProteinID:
AJW39819
UniProt:
A0A0D5A9V5
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Position
complement(1862298..1863152)
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AA seq
284 aa
AA seq
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MQPTSRVSVGSATVVGVPITVSTVNVNGIRAAVRKGMLPWLEATDADVICLQETRANDGE
LTKALAPALDAGWHLASAEPSAKGRNGVALLSKAAPDAIRTGIGAVEFADAGRYIEADFG
DVTVASLYLPSGEVGTERQDEKERFMAAFAKYLAKTAKSAKSENRDVVVCGDWNIAHTEA
DLKAWKTNRKNSGFLPEEREWVSRLLAEKAPWTDVVRVLHPGVEGPYSWWSYRGKAFDND
AGWRIDYQLATSDLAERAKEAITERAEAYDQRWSDHAPVTVRYR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgcagcccacgtcccgtgtgtcggtgggctccgctaccgtcgtcggcgtgccgatcact
gtctccactgtcaacgtcaacggaattcgcgctgctgttcgcaagggcatgctgccgtgg
ctcgaggccaccgatgccgacgtcatctgcttgcaggaaacccgcgccaacgacggggaa
ctgaccaaggcgctggccccggccctcgatgcgggatggcatctggcctcggcggagccg
tccgcgaaaggccgcaacggggtggccttgctgtcgaaggcggctcccgatgccattcgt
accggtatcggggccgtcgagttcgccgatgccggtcgctacatcgaagccgacttcggc
gacgtcaccgtggccagcctgtatctgccgtcgggtgaggtgggtaccgagcgtcaggac
gagaaggaacgtttcatggcggcgttcgcgaagtacctggcgaagacggccaagtccgcg
aagtccgagaatcgcgacgtggtggtctgcggcgattggaacatcgcccacaccgaggcc
gatctgaaggcatggaagaccaaccggaagaactccggttttctgcccgaggaacgggag
tgggtgtcgcggttgctcgccgagaaggccccgtggaccgatgtcgtccgggtgttgcac
ccgggtgtcgagggtccgtacagctggtggtcctaccgcggcaaggccttcgacaacgac
gccggctggcggatcgactatcagttggccaccagtgatctggccgagcgtgccaaggaa
gcgatcaccgagcgggccgaggcgtacgaccagcgatggtccgatcatgctccggtaacc
gtgcgctatcgctag
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