KEGG   Rhodovulum sp. P5: RGUI_3038
Entry
RGUI_3038         CDS       T04813                                 
Name
(GenBank) ClpB protein
  KO
K11907  type VI secretion system protein VasG
Organism
rhc  Rhodovulum sp. P5
Pathway
rhc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:rhc00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RGUI_3038
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:rhc02044]
    RGUI_3038
Secretion system [BR:rhc02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   RGUI_3038
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 Sigma54_activat Zeta_toxin AAA_7 nSTAND3 ATPase_2 NACHT TniB AAA_25 AAA_18 Torsin CbiA AAA_14 Hpr_kinase_C SRP54
Other DBs
NCBI-ProteinID: ARE41179
UniProt: A0A1V0PYF6
LinkDB
Position
2978475..2981186
AA seq 903 aa
MSEISRVSLFGKLNSLGYKAIDEATVFCKLRQNPYVELVHWLFQIVQQPDSDMHRIMEHY
KLDPSVLAKDMTAALDKLPRGATAISDLSEHIEDAVQWAWLYGSLQFNTSHVRTGHLVIG
MMKTPALRNILIGISREFAKIKVDDLIENFADITGGSPEDSLRAQDGSSLGTEPGADSGA
MPSAQLGKQEALKQFCTDMTQQARDGKIDHIVGRDAEIRQIVDILMRRRQNNPILTGEAG
VGKTAVVEGFAMRIARGDVPPSLKDARLLSLDVGLLQAGASMKGEFENRLRQVIEEVQAS
PVPIVMFVDETHTLVGAGGAAGTGDAANLLKPALARGTLRTIGATTWAEYKKHIEKDPAL
TRRFQVVQVEEPALDKALLMMRGIASSLEGHHKVQVLDEGLESAVNLSARYIPARQLPDK
SVSVLDTACARVAVSQHAVPAEVDDARKRIDAYNTELEIIARDESAGQDVTARRAEIGEA
LEKEQARLDALEARWGREKDIVTEILDLRAKLREGGAPVDSEEAEGEEAAEASPMTAEER
AEALAALRAKNAELAEIQDEDPLILPIVDAQAVASVVGDWTGIPVGRMVRNELQTVLDLE
QHLAQRVIGQDHAMQMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEVLY
GGEQNVITINMSEYQEAHTVSSLKGAPPGYVGYGEGGVLTEAVRRKPYSVVLLDEVEKAH
PDVHELFFQVFDKGTMEDGEGRVIDFKNTLILLTSNVGSDLIMDMCADPDLMPEPEGIAK
ALREPLLKVFPAALLGRLVTIPYYPLSPEILGAITRLQLGKIKKRVEATHKVPFAYSDAV
VDTIVSRCQELESGGRMIDAIVTNTMLPDISREFLMRMIAGEEVQQVAIDVTDGTFTYAF
DAA
NT seq 2712 nt   +upstreamnt  +downstreamnt
atgtcggaaatcagccgggtctcgcttttcggcaagctcaacagtctgggctacaaggcc
atcgacgaggctacggtgttctgcaagttgcggcagaacccttacgtcgagttggttcac
tggctgttccagatcgtgcagcagccggacagcgacatgcaccgcatcatggagcattac
aagctggacccctcggtgctggcgaaagacatgaccgccgcgctggacaagctgccccgc
ggcgccaccgcgatcagcgatctgtccgaacatatcgaggacgcggtgcaatgggcgtgg
ctttacggctcgctccagttcaacaccagccatgtgcgcaccgggcatctggtcatcggc
atgatgaagacgcccgcgctgcgcaacatcctgatcgggatcagccgggagttcgccaag
atcaaggtcgacgacctgatcgagaatttcgccgacatcacgggcggctcgcccgaggac
agcctgcgggcgcaggacggctcttccctcgggaccgaaccgggggcggacagcggggcg
atgccctcggcgcaactgggcaagcaggaggcgctgaagcagttctgcaccgacatgacc
cagcaggcccgcgacggcaagattgaccatatcgtcgggcgcgacgcggaaatccggcag
atcgtcgatatcctgatgcggcggcggcagaacaacccgatcctgaccggggaggccggg
gtcggcaagaccgcggtggtagaagggttcgcgatgcgcatcgcgcgcggcgacgtcccg
ccctcgctcaaggacgcgcggctgttgtcgctggatgtcggtcttttgcaggctggcgcg
tcgatgaagggggagttcgagaaccgcctgcggcaggtgatcgaggaggtgcaggccagc
cccgtgcccatcgtgatgttcgtggatgagacccatacgctggtgggggccggtggcgcg
gcgggcacgggcgatgcggcgaacctgctgaaaccggcgctggcgcgcggcacgctcagg
accatcggcgccaccacctgggccgaatacaagaagcatatcgagaaggacccggccctg
acccgccgcttccaggtggtgcaggtggaggaaccggccctcgacaaggcgctgttgatg
atgcggggtatcgcgtccagccttgaagggcaccacaaggtgcaggtgctggacgagggt
ttggaatcggcggtgaacctgtcggcgcgctatatccccgcgcggcagttgccggacaag
tcggtcagcgtgctggataccgcctgcgcgcgcgttgccgtcagccagcacgccgtgccg
gccgaggtcgacgatgcccgcaaacggatcgacgcgtacaataccgaactggagatcatc
gcccgcgacgaaagcgccgggcaggacgtgaccgcgcggcgggcagagatcggcgaggcg
ctggaaaaggaacaggcgcgactggacgcgttggaggcgcgctggggccgcgaaaaggac
atcgtcacggaaatcctcgacctgcgcgccaagctgcgcgagggcggcgccccggtggac
agcgaagaagcggaaggcgaggaagccgccgaagcctctcccatgacggcggaggagcgg
gccgaggccctggccgccttgcgcgccaagaatgcggaactggcagagattcaggacgaa
gacccgctgatcctgcccatcgtcgatgcgcaggctgtggccagcgtcgtgggggactgg
acgggcattccggtggggcgcatggtccgcaacgaattgcagaccgtgctggatctggaa
cagcatctggcccagcgggtgatcgggcaggaccatgccatgcagatgatcgccaagcgg
atccagaccagccgcgcaggcctcgacaaccccaacaagcccatcggggtgttcatgctg
gccgggacatccggcgtgggcaagacggaaacggcgctcgccctggccgaggttctgtat
gggggcgaacagaacgtcatcaccatcaatatgagcgagtatcaggaggcgcacacggtc
agcagcctgaagggcgcgccgccgggctatgtcggctatggcgagggcggtgtgctgacc
gaagcggtgcggcgcaagccctactcggtggtgctgctggacgaggtggaaaaggcgcat
cccgacgtgcacgagctgttcttccaggtgttcgacaagggcacgatggaagatggcgag
ggccgggtgatcgacttcaagaacacgctgatcctgctgacctcgaatgtcgggtcggac
ctgatcatggacatgtgcgccgaccccgacctgatgccagagccggagggcatcgccaag
gccctgcgtgaacctttgcttaaggtctttcccgcggccctgcttggccggcttgtcacg
atcccctactatccgctcagcccggaaattctgggcgcgatcaccaggttgcagcttggc
aagatcaagaagcgggtggaggccacgcacaaggtgccctttgcctattccgacgcggtg
gtggacaccatcgtgtcgcgctgtcaggaattggagtccgggggccgtatgatcgacgcc
atcgtgaccaacaccatgctgcccgatatcagccgcgaattcctgatgcggatgatcgcg
ggcgaggaggtgcagcaagtggccatcgacgtcacggacggtaccttcacctacgccttc
gacgcggcgtag

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