Rhodanobacter denitrificans: R2APBS1_3523 Help Entry R2APBS1_3523      CDS       T02495                                  Name (GenBank) NAD-dependent DNA ligase   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism rhd  Rhodanobacter denitrificans Pathway rhd03030   DNA replication rhd03410   Base excision repair rhd03420   Nucleotide excision repair rhd03430   Mismatch repair Brite KEGG Orthology (KO) [BR:rhd00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     R2APBS1_3523    03410 Base excision repair     R2APBS1_3523    03420 Nucleotide excision repair     R2APBS1_3523    03430 Mismatch repair     R2APBS1_3523  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:rhd03032]     R2APBS1_3523    03400 DNA repair and recombination proteins [BR:rhd03400]     R2APBS1_3523 Enzymes [BR:rhd01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      R2APBS1_3523 DNA replication proteins [BR:rhd03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      R2APBS1_3523 DNA repair and recombination proteins [BR:rhd03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      R2APBS1_3523    NER (nucleotide excision repair)     GGR (global genome repair) factors      R2APBS1_3523    MMR (mismatch excision repair)     DNA ligase      R2APBS1_3523   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       R2APBS1_3523 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB DUF3701 HHH_5 RNA_ligase Motif Other DBs NCBI-ProteinID:  AGG90586 UniProt:  M4NSW7 LinkDB All DBs Position complement(3734714..3736399) Genome browser AA seq 561 aa AA seqDB search MRTTCLLLILLASMAGAAHAAGCPDWPPARARQELAALHERLDGWNHGYRVEGQSPVSDA VYDQASQRLAAWRRCFPAQAPAPLAPLADAGGRVRAPVAQTGLAKLPDAAAIGAWMHAHG DRDLWVQPKADGVAVTLLYVDGRLRQATSRGDGLHGSDWMALAQLIDAIPKRLPQAPARL VLQGELYWRLPGHVQADDGGANARAAVAGALAREALDADSAAQIGLFVWDWPGGPADMPA RLAGLAAMGLADSVAYTQPVATLEEVKRWRERWYRHPMPFAADGAVLRQGHRPPAASWPA APPDWAVAWKYPAASALAEVRAVDFTVGRSGRITPVLELAPVQLDDHRVQRVSVGSLKRW QQLDIRPGDQVEVVLAGLTIPRLQSVVWRAQQRVAVTPPDPQAHGPLSCWQATPGCEQQF RARLVWLGGRQGLQLEGLGAETWQALIDAGLVHGLLDWMELTPAQLAGVPGLGTSRATAL ARSFAAARDRPFARWLQALGAPSGVAAGLPDWAALSARAAGDWQAMEGIGAGRANQLVAF FDCPAVRAQAARLHAAGVQGF NT seq 1686 nt NT seq  +upstreamnt  +downstreamnt atgcgaacgacttgcctgttgctgatcctgctcgcctcgatggccggtgcagcgcacgcg gcgggttgcccggactggccgccggcgcgggcgcggcaggaactcgccgcgctgcatgag cggctggacggctggaaccatgggtaccgcgtcgagggccagtcgccagtgagcgatgcg gtctacgaccaggccagccagcgccttgccgcgtggcggcgctgcttccccgcgcaggcg ccggcgccgctggcgccgctggccgacgccggcggccgggtgcgtgcaccggtggcgcag accggcctggccaagttgccggatgccgccgcgatcggcgcctggatgcacgcgcacggc gaccgcgacctgtgggtgcagccgaaggccgatggcgtggcggttaccttgctgtatgtg gacggccgcttgcgccaggcgaccagtcgcggcgatggcttgcacggctcggactggatg gcgctggcccaactgatcgacgcgataccgaagcggctgccgcaggcgccggcacgcttg gtgttgcagggcgagctgtactggcgcctgcccggccacgtgcaggccgacgacggcggc gccaacgcgcgcgcggcggtggccggtgcgctggcgcgcgaggcgctggatgccgacagc gccgcgcagatcggcctgttcgtgtgggactggcccggcggcccggccgacatgccggcg cggctggccgggctggcggcgatggggctggccgacagcgtggcgtacacgcagccggtg gccacgctggaggaggtgaagcgctggcgcgagcggtggtatcgccatcccatgccgttc gccgccgacggcgcggtgctgcgccagggccatcggccgccggccgcgagctggccggcg gcaccgccggactgggcggtggcgtggaaatatccggccgcgtcggcgctggccgaggtg cgcgcggtggatttcacggtggggcgcagcggccgcatcacgccggtgctggaactggcg ccggtgcagctggacgaccatcgcgtgcagcgagtcagcgtgggttcgctcaagcgctgg caacagctcgacatccgccccggcgaccaggtcgaggtggtgctcgccgggctgaccatc ccgcgcctgcaatcggtggtatggcgcgcgcagcagcgcgttgcggtgacgccgcccgac ccgcaggcgcacggcccgttgagttgctggcaggccacgcccggctgcgagcagcagttc cgcgcgcggctggtgtggctgggtggccggcagggcctgcagctggaggggctgggcgcg gagacgtggcaggccttgatcgacgccgggctggtgcatggcctgctggactggatggag ctcacgccggcacagctggcgggcgtgcccggcctgggcaccagccgtgcgacggcgctg gcgcgcagctttgccgcggcgcgcgatcgcccgttcgcgcgctggttgcaggcgctgggc gcgccctccggcgtggcggccggactgcccgactgggccgccctgagcgcgcgcgcggcc ggcgactggcaggcaatggaaggcatcggcgccggccgcgcgaaccagctggtggcgttt ttcgactgccccgcggttcgcgcgcaagccgcccgcctgcacgcggccggcgtgcagggt ttctga

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