Ruminiclostridium herbifermentans: EHE19_017205
Help
Entry
EHE19_017205 CDS
T07161
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
rher
Ruminiclostridium herbifermentans
Pathway
rher00550
Peptidoglycan biosynthesis
rher01100
Metabolic pathways
rher01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rher00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EHE19_017205
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EHE19_017205
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
rher01003
]
EHE19_017205
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
EHE19_017205
Enzymes [BR:
rher01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
EHE19_017205
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EHE19_017205
Glycosyltransferases [BR:
rher01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
EHE19_017205
Peptidoglycan biosynthesis and degradation proteins [BR:
rher01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
EHE19_017205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
SHOCT
Motif
Other DBs
NCBI-ProteinID:
QNU66566
UniProt:
A0A4V6EQT6
LinkDB
All DBs
Position
4207845..4210334
Genome browser
AA seq
829 aa
AA seq
DB search
MKSNGNTASGKSEQKKKTKKKSVYSQFALAVLKTVVVIFISIGCTFAGILAGACLGYLKS
ADAITPNQLELTKLTSFIYDSEGAEIAQIKGSENRVVVVHSEIPDNLRNAFIAIEDKNFY
NHGGVDSKRFIKAAISYIINLGDASFGGSTITQQLVKNITGNEDTTIKRKVQEAWQAIQL
ERNLSKDQILDNYMNRITTGSGCYGVQAAAKKFFNKDVKDLSLAECASIAGVTKSPGYYD
PTLGENNKKRNKERQEIILRAMLDQGKITQNEYDEAIAEELKIYENKTDENVSVNNVQSY
FVDYVLTQVQKDLMEKYNISSDAANIKIYNSGLKIYTTQDSKIQKIMNEEFTNIENFPVN
KKISNPDMQAQGAMLVLDPNTGYIRGMYGAYGYKKGNFTLNRATSMKRQPGSSFKPIAVY
GPSIDLGLITPATVVDDVPIYLDPQNPTTPYPKNSESSFRGLSTIRSGIRSSINVVAAKV
FMDYLGAEKSVEYLKKVNIDRSKEKYVSMALGGLNEGVNPLIMASAYVPFVNNGVYFEPI
AYTKVTDESGNIILDKTKEQKKNIVYKETTAFLMTNMMRDVVTSGTAATGGLGTVKNSAG
KVIPTAGKTGTTNDNYDKWFVGYSPYYVGATWYGYNNPKSLKSSEYNQSLLLWNKVMNRI
HADLEVKDFQQPEGLVKKSVCIYSGKLPGEHCSHDPRGNAIRTEYFVKGTEPKDTCDVHV
LARVDTTSKDIYGRPLLANEHCPASAVQERVFIQRPVPYLPKDPSLVSKIKDWIYELPQG
EYCTIHSSSSIIGPPSNSTKGPNAPLPQFGQGPILDTPFFLNEDLDVIP
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgaaatctaacggaaatactgcttcaggcaaaagtgagcaaaaaaagaaaacaaagaaa
aaaagcgtgtattcacaatttgctctcgctgttttgaaaacagtagttgttatctttata
tcaattggctgcacttttgctggtatattagcaggtgcttgtcttggttatttaaaaagc
gctgatgcaattacaccaaatcaacttgaattaactaaacttacttcttttatatatgat
tcagaaggtgctgaaatagctcagattaaaggcagtgagaacagagttgtagtagttcat
tcagaaattccagataatttgagaaatgcatttatcgcaattgaagataagaacttttat
aatcatggaggcgttgacagcaaaagatttataaaagcggctattagttatattattaat
ttaggagatgcttcctttggcggtagtaccatcactcaacaattagttaaaaatattact
ggcaacgaagatactacaataaaaagaaaagtccaggaagcttggcaagctattcagctt
gaaagaaatctctcaaaggatcaaattcttgataattacatgaaccgtattactacaggt
tcaggctgctatggtgtacaagctgcagcaaaaaagttctttaataaggatgtaaaggac
ttgtcacttgctgaatgtgcaagtattgctggtgtaacaaaatctcctggatattatgat
cctactttgggtgaaaataataaaaaaagaaacaaagaacgtcaagagattattttacga
gcaatgctggatcaaggtaaaattactcaaaatgagtatgatgaggctattgctgaagaa
ctgaaaatttacgaaaacaaaacagatgagaatgtttctgttaataatgttcagagttat
tttgttgactatgttctgactcaggttcaaaaggacttaatggaaaagtacaatatttct
agtgatgctgctaatataaagatttacaatagcggcttgaaaatatatacaacccaggac
tctaaaattcaaaaaataatgaatgaagagtttacgaatatagaaaattttcctgtaaac
aaaaagataagtaatcctgatatgcaggctcaaggtgcaatgcttgtcttagatcctaat
acaggatatattcgtggtatgtatggggcatatggatataaaaagggtaatttcactctt
aacagagctacctcaatgaaaagacagcccggttcaagctttaagccaatagctgtttat
ggtccgtcgatagacttgggcttaataacacctgcaactgttgtagatgatgtcccaatt
tatcttgacccgcagaacccaactacaccatatcctaaaaactccgaatctagctttaga
ggtctttctacaataagaagtggtattagaagttccataaatgttgtagcagcaaaagtt
tttatggattatttaggtgctgaaaaatcagttgaatacctaaagaaggtaaatattgat
agatctaaagaaaaatatgtttctatggctcttggtggtcttaatgagggtgttaatcca
ttaattatggcttctgcatatgttccctttgttaacaacggtgtatattttgaaccaata
gcatacacaaaggttactgacgaaagtggcaatataatacttgataaaactaaagaacag
aaaaagaacattgtatataaagaaacgacagccttccttatgactaatatgatgagagat
gttgtaacatctggtacagctgctacaggcggtctaggaactgttaaaaactcagccgga
aaagttataccaacagcaggaaaaacaggtacaactaacgataattacgacaaatggttt
gttggatactctccatattatgtaggtgctacatggtatggatacaataacccaaagtca
ttaaaaagttctgagtataatcaatcccttctattatggaataaagtaatgaataggata
catgctgacttagaggttaaagacttccagcaacctgagggacttgtaaagaaatctgtc
tgcatatattcaggtaaattaccaggtgagcattgcagccatgatcctagaggaaatgca
atcagaactgagtattttgtaaaaggtacagaacccaaagatacctgtgatgtccatgtg
ttagcaagagtggatactactagcaaagacatatacggcagaccattgttagcaaacgaa
cattgtcctgcttcggcagtacaagaaagagtatttattcaaagaccagttccttacctt
cctaaagacccatctttagtgtcaaagattaaggattggatatatgaactccctcaaggt
gagtactgtactatacacagttcatctagtattatagggcctccatctaactctacaaaa
ggacctaatgctccacttccgcaatttggtcagggcccaattctagatactccttttttt
ctgaatgaggacttagatgttattccataa
DBGET
integrated database retrieval system
