Rodentibacter heylii: FEE42_07440
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Entry
FEE42_07440 CDS
T06473
Gene name
rfaC
Definition
(GenBank) lipopolysaccharide heptosyltransferase RfaC
KO
K02841
heptosyltransferase I [EC:2.4.-.-]
Organism
rhey
Rodentibacter heylii
Pathway
rhey00540
Lipopolysaccharide biosynthesis
rhey01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhey00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
FEE42_07440 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
FEE42_07440 (rfaC)
Enzymes [BR:
rhey01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.- Glycosyltransferases
2.4.-.-
FEE42_07440 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
rhey01005
]
Core region
FEE42_07440 (rfaC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Epimerase_2
UPF0181
Thioredoxin_9
CytoC_RC
Motif
Other DBs
NCBI-ProteinID:
QIA77207
LinkDB
All DBs
Position
complement(1481438..1482397)
Genome map
AA seq
319 aa
AA seq
DB search
MKICLIKTSSMGDVIHTLPALTDAQQMIPNLTVDWVVEENFAEIPQWHSALHQVIPIALR
RWRKSPFSSQTKNEWKIYRTLLQKERYDAVIDAQGLFKSAFFATRLANGTTHGYDCHSIR
EPIASFFYEKKYAISYQQHAVERIRQLFALSLNYELPHSQGDYGIAQHFTAASIEPYVIF
FHATTRDDKHWLESEWENLIEKMTALSVQIRLPWGNEKEKERAERLAKNYPNVQVLPKLT
LTELAKQIANATAVVSVDTGLSHLTAALDKPNITLYGATDPTLIGCYGKNQQYLSASSMA
EISAEQVFSRLEPLLNGNQ
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatttgtttaattaaaacttcctctatgggtgatgtgatccacacattgcctgca
ttaaccgatgcccaacaaatgatcccaaatttaaccgtggattgggtggtagaagaaaat
tttgccgaaattccccaatggcattcggctcttcatcaagtgatacccattgccttacgc
cgttggcgtaaatcccctttttcctcacaaacaaaaaatgagtggaaaatttaccgcact
ttactccaaaaagaacgttatgatgccgttattgacgctcaaggattatttaaaagtgca
ttttttgctacccgtctcgctaacggcacaacgcatggctatgattgccatagcattcga
gagccgattgcttcctttttttatgagaaaaaatacgcaatttcttatcagcaacacgcc
gttgaacgtattcggcagttatttgcactaagccttaattatgaattgccgcattcgcaa
ggtgattacggcatcgcacaacattttactgccgcctccattgagccttatgtgattttt
tttcatgccactacccgagatgataaacattggcttgaatcggaatgggaaaatttaatt
gaaaaaatgaccgcactttccgtgcaaatccgtttaccttgggggaatgaaaaagaaaaa
gagcgggcggaacgcttggcaaaaaattatccgaatgttcaagtactgccaaaactaacg
ctcaccgaattggcaaagcaaattgcgaatgcgactgcggtagtctctgtggatacgggc
ttgtcgcatttaaccgcggctttagataaaccgaatattaccctttatggtgcaacagat
ccgaccttaatcggttgttatggtaagaatcagcaatatttatctgcctcaagtatggct
gaaatctcagccgaacaagtattttcaaggcttgaacctctattaaatggcaatcagtaa
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