Rhodoferax sediminis CHu59-6-5: EUB48_18220
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Entry
EUB48_18220 CDS
T06165
Symbol
ampD
Name
(GenBank) 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD
KO
K03806
N-acetyl-anhydromuramoyl-L-alanine amidase [EC:
3.5.1.28
]
Organism
rhf
Rhodoferax sediminis CHu59-6-5
Brite
KEGG Orthology (KO) [BR:
rhf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
EUB48_18220 (ampD)
Enzymes [BR:
rhf01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.28 N-acetylmuramoyl-L-alanine amidase
EUB48_18220 (ampD)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhf01011
]
Peptidoglycan biosynthesis and degradation
Amidase
EUB48_18220 (ampD)
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Gene cluster
GFIT
Motif
Pfam:
Amidase_2
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
QDL39015
UniProt:
A0A515DF36
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All DBs
Position
3779634..3780248
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AA seq
204 aa
AA seq
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MTIPPDRHPASTLWQDGWYRFARVLRSPNAGERPANALIDLIVLHSISLPPGHYGGDEVL
QLFTNTLHWDAHPYFESIRGMQVSAHFFIRRNGELWQFVSCDARAWHAGRSHYRGRDNCN
DDSIGIELEGVEGEAFEAAQYETLAGLCAALAQRYPVAYIAGHEHIAPGRKQDPGNGFRW
AFLQRALGWRTQCFPAGAMPFHDA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgacgataccccctgatcgccaccccgccagcaccctatggcaggacggctggtaccgt
tttgcgcgcgtgctgcgctcacccaacgccggggagcgcccggccaacgcgctgatcgac
ctgatcgtgctgcactcgatcagcctgccgcccgggcactacggcggcgacgaggtgctg
cagctgttcaccaatacgctgcactgggatgcccacccctacttcgaatcgattcgtggc
atgcaggtgtcggcccacttcttcattcgccgcaatggggaactatggcagttcgtcagc
tgcgatgcgcgcgcctggcacgcggggcgctcgcattaccgcggacgcgacaactgcaac
gacgactcgatcggcattgaactggaaggagtggagggcgaggcgttcgaggccgcccag
tatgaaaccctggcgggcctgtgtgccgcgctggcgcagcgctacccggtggcctatatc
gccggtcacgaacacatcgccccgggtcgcaagcaggatccgggcaacggctttcgatgg
gcttttttgcaacgcgcactgggctggcgaactcagtgttttcccgctggtgcgatgcca
tttcacgacgcttga
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