Rhodoferax sediminis Gr-4: EXZ61_08955
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Entry
EXZ61_08955 CDS
T06176
Symbol
purD
Name
(GenBank) phosphoribosylamine--glycine ligase
KO
K01945
phosphoribosylamine---glycine ligase [EC:
6.3.4.13
]
Organism
rhg
Rhodoferax sediminis Gr-4
Pathway
rhg00230
Purine metabolism
rhg01100
Metabolic pathways
rhg01110
Biosynthesis of secondary metabolites
Module
rhg_M00048
De novo purine biosynthesis, PRPP + glutamine => IMP
Brite
KEGG Orthology (KO) [BR:
rhg00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
EXZ61_08955 (purD)
Enzymes [BR:
rhg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
EXZ61_08955 (purD)
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Gene cluster
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Motif
Pfam:
GARS_A
GARS_N
GARS_C
ATP-grasp
ATP-grasp_2
ATP-grasp_3
RimK
ATP-grasp_5
ATP-grasp_4
Motif
Other DBs
NCBI-ProteinID:
QDL54284
UniProt:
A0A515ENR3
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Position
1916896..1918203
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AA seq
435 aa
AA seq
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MNILVIGGGGREHALAWKLAQSSKVQMVYVAPGNGGTATDQRLKNLNITGVKELREWAIS
HKIDLTVVGPEGPLAAGVVDEFRAHGLRIFGPTKAAAQLESSKAFSKAFMRRHSIPTAEY
ATFSDPVAAHAYVDKMGAPCVVKADGLAAGKGVVVAMSLAEAHEAIEFMLVGNALGVVHN
DGDDGKAVPRVVIEEFLEGEEASFIVMCDGKNVLPLATSQDHKRLQDGDQGPNTGGMGAY
SPAPVVTPSVHAKAMREVILPTIKGMEKDGIPFSGFLYAGLMIDANGQPKTLEFNCRMGD
PETQPIMMRLKSDLVDVLMAATEPHGAGKLDEMELQWDRRTALGVVLAAPGYPLQPKTGG
VIRGLPKDSDDAAVFHAGTQLVEGQVLSSGGRVLCATVLADSVRQAQQRAYQVISDIHFD
GMQYRTDIGHRAVKA
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaacatccttgtaatcggtggcggtggccgtgaacacgcattggcttggaaactggcc
cagtcgtccaaagtgcaaatggtgtacgtggctccgggcaatggtggaaccgctacagac
cagcgcttgaaaaacctgaacatcactggggtcaaagagcttcgtgaatgggccatctcc
cacaaaattgatctcaccgtggtcggccctgagggcccattggccgcaggcgttgtagac
gagtttagggcgcatggcctgcgtatttttgggccaaccaaggcggcagcgcagttggaa
agctccaaagcgttttccaaggcgtttatgcgtcgccactccattcctaccgccgagtac
gccacgttttcagaccccgtggcggcccacgcgtatgtggacaaaatgggcgcaccctgc
gtggtcaaggccgatggcttggctgccggcaagggcgtagtggtggccatgagtttggcc
gaggcccacgaggccattgaattcatgctggtgggcaatgctttgggggtggtgcacaac
gatggcgacgacggcaaggcggtgccacgcgtggtcattgaagagttcttggaaggcgag
gaagcgagctttatcgtcatgtgcgatggaaaaaatgtgttgcccttggcaaccagccaa
gaccacaaacggttgcaagatggtgatcaaggccctaacacgggtggtatgggggcttac
tcaccagcgcccgtagtgacgcctagcgtgcatgcaaaggccatgcgggaagtgatactg
ccaaccatcaaaggaatggaaaaagacggcataccttttagtggctttttgtacgccggg
ctgatgattgatgccaacggtcagcccaagacactggagttcaactgccgcatgggtgac
cctgaaacccaaccgatcatgatgcgcctgaaatccgatttggtggacgtgctgatggcg
gccacggagccgcatggcgctggcaaactggatgagatggagttgcagtgggataggcgc
acggccctgggcgttgtgttggcagcccccggctatcccttgcagccaaagactggtggc
gtgatccgtggcctgcccaaagacagcgatgatgcagcggttttccatgcaggcactcag
ctggtagaggggcaagtactttcttcaggcgggcgcgtactgtgcgccacagtactcgcg
gacagcgtgcgccaagcgcagcagcgtgcgtaccaagttatcagtgatattcacttcgat
ggtatgcagtaccgcaccgacatcggacaccgcgccgtcaaggcttga
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