Sinorhizobium fredii NGR234: NGR_c11000
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Entry
NGR_c11000 CDS
T00888
Symbol
gatB
Name
(GenBank) aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B
KO
K02434
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:
6.3.5.6
6.3.5.7
]
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi00970
Aminoacyl-tRNA biosynthesis
rhi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
NGR_c11000 (gatB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
rhi03029
]
NGR_c11000 (gatB)
Enzymes [BR:
rhi01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.6 asparaginyl-tRNA synthase (glutamine-hydrolysing)
NGR_c11000 (gatB)
6.3.5.7 glutaminyl-tRNA synthase (glutamine-hydrolysing)
NGR_c11000 (gatB)
Mitochondrial biogenesis [BR:
rhi03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
NGR_c11000 (gatB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GatB_N
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
ACP24886
UniProt:
C3MAA7
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All DBs
Position
1165894..1167396
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AA seq
500 aa
AA seq
DB search
MSIVDVRTPDPKRFIPGATGDWEVIIGLEVHAQVLSNSKLFSGASTEFGNAPNANVSLVD
AAMPGMLPVINEECVKQAVRTGLGLKAKINRRSIFDRKNYFYPDLPQGYQISQYKDPIVG
EGKIIISIGPDRQGQFEDVEIGIERLHLEQDAGKSMHDQHPSMSYVDLNRSGVALMEIVS
KPDLRSSDEAKAYLTKLRSILRYLGTCDGNMDEGSMRADVNVSVRRPGAAFGTRCEIKNV
NSIRFVGQAIEYEARRQIGILEDGGTIDQETRLFDPNKGETRSMRSKEDAHDYRYFPDPD
LLPLEFDDAFVEALKTDLPELPDDKKDRFVRDLGLSVYDASVLVSEKAIADYFEAVAEGR
DGKIAANWVINDLLGALNKAGKTIEETPVSPAQLGGVIDLIKAGTISGKLAKDLFEILWN
EGGDPAEIVESRGMKQVTDTGAIEKAVDEIIAANPDQVEKAKAKPSLAGWFVGQVMKATG
GKANPQAVQALVKSKLGIEE
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcgtcgacgtccgcactcccgatccgaaacgcttcattcccggcgccaccggc
gactgggaggtcatcatcggcttggaggtccatgcccaggtgctgagcaattcgaagctg
ttctccggggcgtcgaccgagttcggcaacgcgccgaatgccaacgtctcgctggtcgat
gcggccatgcccggcatgctgccggtcatcaacgaggaatgtgtcaagcaggcggtgcgc
accggcctcggcctcaaggccaagatcaaccgtcgctcgatcttcgaccgcaagaactac
ttttatccggatctgccgcagggctaccagatctcacagtacaaggatccgatcgtcggc
gaaggcaagatcattatttcgatcggcccggaccgccagggacagttcgaggatgtcgag
atcggcatcgagcgcctgcatctggaacaggatgccggcaagtcgatgcatgatcagcat
ccctccatgtcctatgtcgacctcaaccgctccggcgtcgcgctgatggagatcgtctcc
aagccggacctgcgctcgtcggacgaggccaaggcctatctcaccaagctgcgttcgatc
ctgcgctatctcggcacctgcgacggcaacatggacgaggggtcgatgcgggccgacgtc
aacgtctcggtgcgccgcccgggtgcggctttcggaacgcgctgcgaaatcaagaacgtc
aactcgatccgcttcgtcggccaggcgatcgaatacgaggcgcgtcgccagatcggcatc
ctcgaggatggcggcacgatcgatcaggaaacccggctcttcgacccgaacaagggcgag
acgcgctcgatgcgctccaaggaagacgcgcacgactaccgctatttccccgatccggac
ttgttgccgctcgagttcgacgacgccttcgtcgaggcgctcaagaccgatcttccggaa
ctgccggacgacaagaaggaccgcttcgtccgtgacctggggctctcggtctacgatgcc
tccgttctcgtctcggaaaaggcgatcgccgactatttcgaggcggttgccgaaggacgc
gacggcaagattgccgcgaactgggtgatcaacgacctgctgggcgccttgaacaaagcc
ggcaaaaccattgaagagactccggtttcgccggcccaactgggcggcgtcatcgacctc
atcaaggccggtaccatctccggcaagctcgccaaggatctcttcgaaatcctctggaac
gaaggtggcgacccggccgagatcgtcgagagccgtggcatgaagcaggtcaccgacacc
ggcgcgatcgagaaggccgtcgatgaaatcatcgccgccaacccggaccaggtggaaaag
gccaaggcgaagccgtcgcttgccggctggttcgtcggccaggtgatgaaggcgaccggc
ggcaaggccaatccgcaggcggtgcaggctctcgtcaagtccaagctcggcatcgaagag
tga
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