Sinorhizobium fredii NGR234: NGR_c24450
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Entry
NGR_c24450 CDS
T00888
Name
(GenBank) ABC transporter, periplasmic oligopeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NGR_c24450
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c24450
Transporters [BR:
rhi02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NGR_c24450
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACP26202
UniProt:
C3MGD0
LinkDB
All DBs
Position
complement(2542713..2544353)
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AA seq
546 aa
AA seq
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MMHKLNGRFRLLTASAALALAMGAAQPAFAETPADTLVEGFAFDDIITMDPGEAFELSTA
EVTSNTYSLLVRLDLNDTSRVVGDLADSWTVSDDGLTYTFKLKQGMKFASGNPITAEDVA
YSFERAVKLDKSPAFILTQFGLNGDNVTEKAKATDEQTFVFTVDQPYAPSFVLNCLTATV
ASVVDKKLVLEHVKPMTPTAEYKYDNDFGNEWLKTGYAGSGAFKLREWRANEVVVLERNE
AYYGEPAKLARVIYRHMKESSGQRLALEAGDIDVARNLEPGDYEAVGKNADLATTSAPKG
TVYYISLNEKNEKLAKPEVQKAFKYLVDYDAIGATLIKGIGEIHQSFLPKGVLGALNENP
YTFDVAKAKELLAKAGYPDGFTVTMDVRNTQPVTGVAESFQQTLGQAGVKLEIIPGDGKQ
TLTKYRARNHDMYIGQWGMDYFDPHSNADTFTNNPDNSDAGTNKTLAWRNAWDVPELSKK
TKEALLERDGAKRAEIYKELQKSVLDDSPFVIIFQQTEVAGLRGSLKGFKLGPSFDTNYV
WNVSKE
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgatgcataagctcaatggacgttttcgacttctgactgcttccgcggcgctcgcgctc
gcgatgggcgccgcgcagccggccttcgccgaaacgccggcggacacgctggtcgagggc
ttcgccttcgacgacatcatcaccatggatccgggcgaagccttcgagctttcgacggcg
gaagtgaccagcaacacctacagcctgctcgtccgtctcgacctcaacgacacgtcaagg
gtggtcggtgatctcgccgacagctggacggtttccgatgacggcctgacctatacgttc
aagctgaagcagggcatgaaattcgcctccggcaatccgatcaccgccgaggacgtcgcc
tattccttcgagcgggccgtcaagctcgacaagagcccggccttcatcctcacccagttc
gggctcaacggcgacaacgtcaccgagaaggccaaggcgacggacgagcaaaccttcgtc
ttcaccgtcgaccagccctacgcaccgagcttcgtgttgaactgcctaactgccaccgtc
gcttccgtggtcgacaagaagctggtgctcgagcacgtcaagccgatgacgccgacggcg
gaatacaaatacgacaacgacttcggcaatgaatggctgaagaccggctatgcgggttcg
ggggcgttcaagctgcgcgagtggcgcgccaacgaagtcgtggttctggagcgcaacgag
gcttattacggtgagccggcgaaactcgcccgggtcatctatcgccacatgaaggaaagc
tccggccagcggctggcgctcgaggcgggggatatcgatgttgcccgcaatctcgagccg
ggcgactacgaggcggtcgggaagaatgccgatctcgcgacgaccagcgcgccgaagggc
acggtttactatatcagcctcaatgagaagaacgagaagctggcaaagcccgaggtgcag
aaggcattcaaatatctggtcgactacgacgcgatcggcgccacgctgatcaagggcatc
ggcgagatccaccagagcttcctgccgaagggcgttctcggagctttgaacgagaacccc
tacaccttcgacgttgccaaggcgaaggaactgctggccaaagccggctatccggacggc
ttcaccgtcaccatggatgtgcgcaacacgcagccggtcacgggtgtagccgaatccttc
cagcagacgctgggacaggccggcgtgaagctcgagatcattccgggcgacggtaagcag
acgctgaccaaataccgtgcccgcaaccacgacatgtatatcggccagtggggcatggat
tatttcgatcctcactccaatgccgacaccttcaccaacaatccggataattccgacgcg
ggtacgaacaagacgctcgcctggcgcaatgcctgggacgttccggaactcagcaaaaag
accaaggaagcgcttctcgagcgcgacggcgccaagcgtgcggagatctacaaggaactg
cagaagagcgttcttgacgacagccccttcgtcatcatcttccagcagacggaggtcgcg
ggcctgcgaggcagcctgaagggcttcaagctgggtccgagcttcgacaccaactacgtc
tggaacgtctccaaggaatag
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