Sinorhizobium fredii NGR234: NGR_c35210
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Entry
NGR_c35210 CDS
T00888
Name
(GenBank) hydrophobe/amphiphile efflux-1 HAE1
KO
K18138
multidrug efflux pump
Organism
rhi
Sinorhizobium fredii NGR234
Pathway
rhi01501
beta-Lactam resistance
rhi01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
rhi00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
NGR_c35210
01503 Cationic antimicrobial peptide (CAMP) resistance
NGR_c35210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhi02000
]
NGR_c35210
01504 Antimicrobial resistance genes [BR:
rhi01504
]
NGR_c35210
Transporters [BR:
rhi02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
NGR_c35210
Antimicrobial resistance genes [BR:
rhi01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
NGR_c35210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
WTF
Motif
Other DBs
NCBI-ProteinID:
ACP27245
UniProt:
C3MC20
LinkDB
All DBs
Position
complement(3736845..3739991)
Genome browser
AA seq
1048 aa
AA seq
DB search
MPSFFIDRPIFAWVVAIFIMVAGIIAIPLLPVSQYPDVAPPQISINTTYPGASSQDTYQS
VTRLIEDELNGVEGLLYFESTSSASGSVEINATFAPGTDPSQASVDIQNRVQRVEPRLPD
SVKQQGVQVDEAGSGFLLIISLTSTDGSMDAIGLGDYLSRNVLSEIQRVQGVGRAQMFAT
ERSMRVWLDPDKMLGLNLTAADVTAAVQAQNAQIASGSIGAQPNPITQQISAPVVIKGQL
SSPEEFGAIVLRANADGSAVRLRDVARIEIGGESYSFSTRLNGKPSAAIAVQLSPSGNAI
STSEAIKARMDELAEFFPPGLEYSIPYDTSPFVAVSIQKVVETLVEAVALVFLVMFLFLQ
NIRYTIIPTLVVPVALLGTCAVMLAMGFSINVLTMFGMVLAIGILVDDAIIVVENVERIM
SEEGLTPKEATRKAMKQITGAVIGITLVLASVFIPMAFFPGAVGVIYRQFSLTMVVSILF
SAFLALSLTPALCASFLKQVPKGHHHAKRGFFGWFNRSFDRTSRGYTGVVGRLVTRAGRF
MIIYLALLGGLAWAFMQLPSSFLPDEDQGFVIVMMQLPSEATGNRTTEVIEQAESIFGQE
QAVDTIVAINGFSFFGTGQNAGLAFVTLKDWSERDADNAAQSIAGRATMAMSQIKDAISF
ALSPPAIQGLGTTGGFSFRLQDRAGLGETALAEARDQLLGLAAQSKVVAGVRFEGMPDAA
QVSVNIDREKANTFGVTFADINSTISTNLGSSYVNDFPNAGRMQRVTVQADEGQRMQTAD
LLNLNVRNSNGGMVPLSAFADIEWVKAPTQTVGYNGYPAVRISGEAAPGYSSGDAIAEME
RLVAQLPPGFGYEWTGQSLQEIQSGSQAPLLIGLSCLLVFLCLAALYESWSIPVAVIMVV
PLGVIGAVLAVMMRDMPNDVYFKVGLIAIIGLSAKNAILIIEFAKELREQGKSLIDATLE
AVHLRFRPILMTSLAFTLGVLPLAIATGASSGSQRAIGTGVMGGMISATVLAIFFVPVFF
VFVMKIFGRRKAAGATPQAASESATPAE
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgcccagtttcttcatagacaggccgatctttgcctgggtggtggcgatattcatcatg
gtcgccggcatcattgcgattccgctcttgcccgtgtcgcaatacccggacgtcgcgccg
ccgcagatctcgatcaacaccacctatcccggcgcctcgtcgcaggacacgtatcagagc
gtcacgcggctgatcgaggatgagctgaacggcgtcgaaggcctgctttacttcgaatcg
acctcgagcgcctccggctcggtggagatcaacgccaccttcgccccgggcaccgacccc
agccaggcctccgtcgacatccagaaccgggtgcagcgcgtcgagccgcggctgcccgac
tcggtgaagcagcagggcgtccaagtggacgaggccggttccggcttcctgctgatcatc
tcgctcacctccaccgacgggtcgatggacgcaatcggcctcggcgattatctgagccgc
aacgtcctgagcgaaatccagcgcgtgcagggcgtcggccgcgcccagatgttcgcgacg
gagcgctcgatgcgcgtctggctcgatccggacaagatgctcggcctcaacctgaccgcc
gccgacgtgaccgcggcggtccaggcgcagaacgcccagatcgcctcgggctcgatcggc
gcccagccgaatccgatcacccagcagatcagcgccccggtggtgatcaagggccagctg
tcctcgcccgaggaattcggcgccatcgtgcttcgggcgaacgccgacggctccgccgtc
aggctgcgcgatgtcgcccgcatcgagatcggcggtgagagctattccttctcgacgcgg
ctcaacggcaagccttcggcggccatcgccgtgcagctgtcgccgagcggcaatgcgatc
tcgacctcggaggcgatcaaggcgcggatggatgaactcgccgagttcttcccgccgggg
ctcgaatattccatcccctatgacacctctcccttcgtcgccgtctcgatccagaaggtc
gtcgagacgctggtcgaagccgtcgcgctggtcttcctggtgatgttcctgttcctgcag
aacatccgctacacgatcatcccgacgctggtcgtgccggttgcgcttctcggcacctgc
gcggtcatgctggcgatgggcttctccatcaacgtgctcaccatgttcggcatggtgctg
gcgatcggtatcctcgtcgacgatgcgatcatcgtcgtcgagaacgtcgagcgcatcatg
tcggaggaagggctgacgccgaaggaggcgacccgcaaggcgatgaagcagatcaccggc
gcggtcatcggcatcacgctggtgctcgcttcggtgttcattccgatggccttcttcccg
ggcgccgtcggcgtaatctatcgccagttcagcctcaccatggtcgtttcgatcctgttc
tcggcgttccttgccctgtcgctgacgccggcgctttgcgccagcttcctgaagcaggtc
ccgaagggccaccaccacgccaagcgcggcttcttcggctggttcaatcgaagcttcgac
cggacgtcgcgcggctataccggcgtggtcgggcgcctggtgacgcgggccggccgcttc
atgatcatctacctggcgctgctcggcggcctcgcctgggcctttatgcagctcccgtcg
tccttcctgcctgacgaggaccagggcttcgtcatcgtcatgatgcagctgccgtccgaa
gccaccggtaaccggacgaccgaggtcatcgaacaggcggagtccatcttcggccaggag
caggcggtcgacacgatcgtggcgatcaacggcttctccttcttcggcaccggccagaat
gcggggctggccttcgtgacgctcaaggactggagcgagcgggatgcggacaacgccgcc
cagtcgatcgccggccgcgcgacgatggcgatgagccagatcaaggacgcgataagcttc
gcgctgtcgccgccggcgattcagggcctcggcaccaccggcggcttctccttccgcctg
caggatcgcgccgggctcggggaaacggcactggccgaagcgcgcgaccagcttctcggc
cttgccgcacaaagcaaggtggtggccggcgtccgcttcgaggggatgcccgatgcggcg
caggtcagcgtcaacatcgaccgcgagaaggccaacaccttcggggtcaccttcgccgac
atcaactcgacgatctccaccaatctcggctcctcctatgtcaacgacttcccgaatgcg
ggccgcatgcagcgcgtcacggtgcaggccgacgagggccaacgcatgcagacggccgat
ctcctgaacctcaatgtccgcaattcgaacggcggcatggttccgctgtcggcctttgcg
gatatcgaatgggtcaaggcgccgacgcagaccgtcggctataacggttacccggcggtg
cgcatcagcggcgaggcggcgcccggctattcctcgggcgatgcgatcgccgagatggag
cggctggtagcccagctcccgccgggcttcggctatgagtggaccgggcaatcgctgcag
gaaatccagtcgggctcgcaggcgccgctgttgatcgggctctcctgcctgctcgtcttc
ctgtgcctggcggcgctttacgagagctggtcgatcccggtcgcggtcatcatggtcgtg
ccgctcggcgtcatcggcgcggtgctggcggtgatgatgcgcgacatgccgaatgacgtc
tatttcaaggtcggcctgatcgccatcatcgggctctcggcgaagaacgccatcctgatc
atcgagttcgccaaggaactgcgcgaacagggaaagtcgctgatcgacgcgacgctcgaa
gccgtgcacttgcgattccggccgatcctgatgacctcgctcgccttcacgctcggcgtc
ttgccgctggcgatcgcaaccggcgcaagctccggcagccagcgcgccatcggcaccggc
gtcatgggcgggatgatctcggcgacggtgctggcgatcttcttcgtgccggtgtttttc
gtgttcgtcatgaagatcttcggacgaagaaaagcggccggggcgacaccgcaggccgca
tccgaaagcgctacgcccgccgagtaa
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