Rhizobium hidalgonense: FFM81_018915
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Entry
FFM81_018915 CDS
T07043
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
rhid
Rhizobium hidalgonense
Brite
KEGG Orthology (KO) [BR:
rhid00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rhid03021
]
FFM81_018915
Transcription machinery [BR:
rhid03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FFM81_018915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_Tnp_1
HTH_psq
Phage_CI_repr
Sigma70_ECF
HTH_20
DUF1804
DUF4635
Phage_antitermQ
CENP-B_N
TetR_C_6
Motif
Other DBs
NCBI-ProteinID:
QKK25280
LinkDB
All DBs
Position
complement(3890487..3891038)
Genome browser
AA seq
183 aa
AA seq
DB search
MTNSRQGDEIKDLIGRVALGDRTAFTALYNQTGPKLFAICLRILRDRTEAEETLQEVYIS
IWQRAGSFQAATGSSSAWLSAIARNRSIDALRARKPVADEIDSAYDLADAAPDPEMQTVT
KDEGRRIDTCMEELEADRAVAVKRAYVEGLSYQELADQFGVPLNTMRTWLRRSLLKLREC
MER
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacagcaggcaaggcgatgagatcaaggacctgatcggccgcgtcgcgctcggc
gaccgcacggccttcacggccctctacaaccagaccggaccgaaactttttgcgatctgc
ctgcgtatcttgagggatcgcaccgaggccgaggaaaccctgcaggaagtctatatcagc
atctggcaaagggctggaagtttccaggcagccacgggttcgtcctcggcctggctctcg
gcaattgcccgcaaccggtcgatcgatgcactgcgagcgcgcaagcctgtcgccgacgaa
atcgacagcgcctacgatcttgccgatgcagcgcccgacccggaaatgcagacggtcaca
aaggatgaaggaaggcggattgacacctgcatggaagagttggaagctgatcgtgcggtc
gcggtgaaacgggcttatgtcgaagggctgagctatcaggaactggccgatcagtttggt
gtcccgctgaacacgatgcggacctggctcaggcgcagcctcttgaaactgagagagtgc
atggaacgatga
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