Rhodoblastus sp. SSC7: HZY79_03560
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Entry
HZY79_03560 CDS
T06718
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rhj
Rhodoblastus sp. SSC7
Pathway
rhj03030
DNA replication
rhj03410
Base excision repair
rhj03420
Nucleotide excision repair
rhj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rhj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HZY79_03560 (polA)
03410 Base excision repair
HZY79_03560 (polA)
03420 Nucleotide excision repair
HZY79_03560 (polA)
03440 Homologous recombination
HZY79_03560 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rhj03032
]
HZY79_03560 (polA)
03400 DNA repair and recombination proteins [BR:
rhj03400
]
HZY79_03560 (polA)
Enzymes [BR:
rhj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HZY79_03560 (polA)
DNA replication proteins [BR:
rhj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HZY79_03560 (polA)
DNA repair and recombination proteins [BR:
rhj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HZY79_03560 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HZY79_03560 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QLP96658
UniProt:
A0A7L5XVZ0
LinkDB
All DBs
Position
complement(735811..738813)
Genome browser
AA seq
1000 aa
AA seq
DB search
MTDALKPGDHVXLVDGSSFVFRAYFQSIRQDQKYNYRSDRLPTGAVRLFCVKLLQFVRDG
AAGVKPTHLAIIFDKSENSFRKQIYPDYKANRSEPPDDLVPQFPLFRAAVRAFGMIPVEQ
DVYEADDLIATYARQAREASADVMIVSADKDLMQXVGPTVSMTXPASGERDERRIGVPEV
IDYFGVPPEKVVDVQALAGDSTDNVPGAPGVGVKTAARLIGEYGDLDALLARAGEIKQPK
RRATLTDPAVVEKIRISKKLVSLVDDVAVVTPLTDLRLVAPDAKXAIAFMKAMEFTTVTR
RVAELYDADAGAIEPDPNFSGPAGWRGRDGEALSPPGEALSAAPAPARSAAPAPAAKVGP
SEAPASRAGAVAAQALEAARTPPIERALYKTVSTKAELEEWIEAARRNGVVAFDTETDSL
DPVTCSLVGVSLATAPGEACYIPLAHRSGEADDLFSDGPALLSGQMAERDCLALLKPLLE
DAAVLKVAQNVKFDELVLAQRAIAVAPCDDTMLMSYVLDSGKNGHGMDELAALHLGWKTI
SFGEVAGTGRSFKGFDRVAIDKATEYSAEDAEVTLRLWMALKPRLAAEGVATVYERLERP
LPSVLQRMERRGIMVDRAILARLSGEFAQAMAGLEHEIHGLAGESFNLGSPKQLGDILFG
KFGLPGAKKTATGAWSTAAGVLEDLAEQGHDLPAKILDWRQMAKLKSTYADALPTYQDDX
GRVHTSYSLASTSTGRLSSSEPNLQNIPVRNEMGRKIRAAFVAPKGRLLMSADYSQIELR
LLAHIADIAQLKRAFADGLDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFG
LANQXGISREEAGAYIKKYFERFPGIRDYMEATKRQAKADGFVTTIFGRKMHFPRIASSN
PSERAFNERAAINAPIQGSAADIIRRAMIRMDEALAKAGVKSEMLLQVHDELVFEVDESE
VEKTIDVARKIMVDAPHPAVTLSVPLQVDARAARNWDEAH
NT seq
3003 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgcgctgaaacccggagatcacgttnttctcgtcgacggctcgtccttcgtg
ttccgcgcctatttccagtcgatccggcaggaccagaaatacaattaccgctccgaccgc
ctgcccaccggcgcggtgcggctgttctgcgtcaagctgctgcaattcgtccgcgacggc
gcggccggcgtgaagccgacgcatctggccatcatcttcgacaagtcggaaaactccttc
cgcaagcagatttaccccgactacaaggccaaccgctccgagccgcccgacgacctcgtg
ccgcaattcccgctgttccgcgccgcggtgcgcgccttcggcatgatccccgtcgagcag
gacgtctacgaggccgacgacctcatcgccacctacgcccgccaggcgcgcgaggccagc
gccgacgtgatgatcgtctccgccgacaaggatctgatgcagnccgtcggcccgaccgtg
tcgatgacgnaccccgcctccggcgagcgcgacgagcggcgcatcggcgtgcccgaggtg
atcgactatttcggcgtgccgccggagaaagtcgtcgacgtgcaggcgctggccggcgac
tccaccgacaacgtgcccggcgcgccgggcgtcggcgtcaagaccgccgcccggctcatc
ggcgaatatggcgacctcgacgcgctgttggcgcgcgccggcgagatcaagcagcccaag
cgccgcgccacgctgaccgatcccgccgtcgtcgagaaaatccgcatctcgaaaaagctg
gtgtcgctggtcgacgacgtcgcggtcgtcacgcccctgaccgatctgcgcctcgtcgcc
cccgacgccaaangagcgatcgccttcatgaaggcgatggagttcaccaccgtgacgcgc
cgcgtcgccgagctttacgacgccgacgccggcgccatcgagcccgatccgaatttttcc
ggccccgccggctggcgcggacgcgacggcgaggcgctgtcgccgccgggcgaggcgctc
tcggccgcgccggcgcccgccagatccgccgcgccggcgcccgccgcgaaggtcgggcca
agcgaggcgccggcgagccgcgccggcgccgtcgccgcgcaggcgctggaggccgcccgc
acgccgccgatcgagcgcgcgctctacaagaccgtgtcgaccaaggccgagctggaggaa
tggatcgaggccgcgcgccgcaacggcgtcgtcgccttcgacaccgagaccgattcgctc
gatcccgtcacctgcagcctcgtcggcgtgtcgctcgcgaccgcgccgggcgaggcctgc
tacatcccgctcgcccaccgctccggcgaggccgacgatctgttcagcgacggtcccgct
ttgctgtccggccagatggcggagcgcgattgcctcgccttgctcaagccgctgctcgaa
gacgccgccgtgctgaaggtcgcccagaacgtcaaattcgacgagctggtgctggcacag
cgcgcaatcgcggtcgcgccctgcgacgacaccatgctgatgagctacgtgcttgactcc
ggcaagaacggccacggcatggacgaactggccgccctgcatctgggctggaagacgatc
tccttcggcgaggtcgccggcacggggcgcagcttcaagggcttcgaccgcgtcgccatc
gacaaggcgaccgaatattccgccgaggacgccgaggtgacgctgcgcctgtggatggcg
ctgaagccgcgcctggcggcggagggcgtcgccacggtctacgagcggctggagcggccg
ttgcccagcgtgctgcaacgcatggagcggcgcggaatcatggtcgaccgcgccattctc
gcgcgcctgtcgggcgaattcgcgcaggcgatggccgggctcgaacacgagattcacggc
ctcgccggcgagagcttcaatctcggctcgcccaagcagctcggcgacattctgttcggc
aagttcggcctgcccggcgccaagaagaccgcgaccggcgcctggtcgaccgccgccggc
gtgctggaggacctcgccgaacagggccacgacttgccggcgaagattctcgactggcgc
cagatggcgaagctgaaatcgacctacgccgacgcgctgccgacctatcaggacgacnga
gggcgcgtgcacacctcctattcgctcgcctcgacctcgacggggcggctgtcctcgtcg
gagcccaatctgcaaaacattcccgtccgcaacgagatgggccggaaaatccgcgccgcc
ttcgtcgcgccgaagggccgccttctgatgtcggccgactattcgcagatcgagctgcgc
ctgctcgcccatatcgccgacatcgcgcaactcaagcgcgctttcgcggacggtctcgac
attcacgcgatgaccgcgtcggagatgttcggcgtgccggtcgaaggcatgccgggcgag
gtgcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttccgcgttcggc
ctggccaaccagnccggcatttcgcgcgaggaggccggcgcctacatcaagaaatatttc
gagcgcttccccggcatccgcgactacatggaggcgaccaagcgtcaggccaaggccgac
ggcttcgtgacgacgatcttcgggcgcaagatgcacttcccgcgcatcgcctcgtcgaac
cccagcgaacgcgccttcaacgagcgcgccgccatcaacgcgccgattcaaggctccgcc
gccgacatcatccgccgcgccatgatccgcatggacgaggcgctggcgaaggcgggcgtg
aaatccgagatgctgttgcaggttcacgacgaactggtgttcgaggtggatgaatccgag
gtcgagaagaccatcgacgtcgcgcgcaagatcatggtcgacgcgccgcacccggccgtg
acgctcagcgtgcccttgcaggtcgacgcgcgggcggcgcgcaactgggacgaggcgcat
taa
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