KEGG   Rhodoblastus sp. SSC7: HZY79_03560
Entry
HZY79_03560       CDS       T06718                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
rhj  Rhodoblastus sp. SSC7
Pathway
rhj03030  DNA replication
rhj03410  Base excision repair
rhj03420  Nucleotide excision repair
rhj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:rhj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HZY79_03560 (polA)
   03410 Base excision repair
    HZY79_03560 (polA)
   03420 Nucleotide excision repair
    HZY79_03560 (polA)
   03440 Homologous recombination
    HZY79_03560 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rhj03032]
    HZY79_03560 (polA)
   03400 DNA repair and recombination proteins [BR:rhj03400]
    HZY79_03560 (polA)
Enzymes [BR:rhj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     HZY79_03560 (polA)
DNA replication proteins [BR:rhj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     HZY79_03560 (polA)
DNA repair and recombination proteins [BR:rhj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     HZY79_03560 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     HZY79_03560 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc
Other DBs
NCBI-ProteinID: QLP96658
UniProt: A0A7L5XVZ0
LinkDB
Position
complement(735811..738813)
AA seq 1000 aa
MTDALKPGDHVXLVDGSSFVFRAYFQSIRQDQKYNYRSDRLPTGAVRLFCVKLLQFVRDG
AAGVKPTHLAIIFDKSENSFRKQIYPDYKANRSEPPDDLVPQFPLFRAAVRAFGMIPVEQ
DVYEADDLIATYARQAREASADVMIVSADKDLMQXVGPTVSMTXPASGERDERRIGVPEV
IDYFGVPPEKVVDVQALAGDSTDNVPGAPGVGVKTAARLIGEYGDLDALLARAGEIKQPK
RRATLTDPAVVEKIRISKKLVSLVDDVAVVTPLTDLRLVAPDAKXAIAFMKAMEFTTVTR
RVAELYDADAGAIEPDPNFSGPAGWRGRDGEALSPPGEALSAAPAPARSAAPAPAAKVGP
SEAPASRAGAVAAQALEAARTPPIERALYKTVSTKAELEEWIEAARRNGVVAFDTETDSL
DPVTCSLVGVSLATAPGEACYIPLAHRSGEADDLFSDGPALLSGQMAERDCLALLKPLLE
DAAVLKVAQNVKFDELVLAQRAIAVAPCDDTMLMSYVLDSGKNGHGMDELAALHLGWKTI
SFGEVAGTGRSFKGFDRVAIDKATEYSAEDAEVTLRLWMALKPRLAAEGVATVYERLERP
LPSVLQRMERRGIMVDRAILARLSGEFAQAMAGLEHEIHGLAGESFNLGSPKQLGDILFG
KFGLPGAKKTATGAWSTAAGVLEDLAEQGHDLPAKILDWRQMAKLKSTYADALPTYQDDX
GRVHTSYSLASTSTGRLSSSEPNLQNIPVRNEMGRKIRAAFVAPKGRLLMSADYSQIELR
LLAHIADIAQLKRAFADGLDIHAMTASEMFGVPVEGMPGEVRRRAKAINFGIIYGISAFG
LANQXGISREEAGAYIKKYFERFPGIRDYMEATKRQAKADGFVTTIFGRKMHFPRIASSN
PSERAFNERAAINAPIQGSAADIIRRAMIRMDEALAKAGVKSEMLLQVHDELVFEVDESE
VEKTIDVARKIMVDAPHPAVTLSVPLQVDARAARNWDEAH
NT seq 3003 nt   +upstreamnt  +downstreamnt
atgaccgacgcgctgaaacccggagatcacgttnttctcgtcgacggctcgtccttcgtg
ttccgcgcctatttccagtcgatccggcaggaccagaaatacaattaccgctccgaccgc
ctgcccaccggcgcggtgcggctgttctgcgtcaagctgctgcaattcgtccgcgacggc
gcggccggcgtgaagccgacgcatctggccatcatcttcgacaagtcggaaaactccttc
cgcaagcagatttaccccgactacaaggccaaccgctccgagccgcccgacgacctcgtg
ccgcaattcccgctgttccgcgccgcggtgcgcgccttcggcatgatccccgtcgagcag
gacgtctacgaggccgacgacctcatcgccacctacgcccgccaggcgcgcgaggccagc
gccgacgtgatgatcgtctccgccgacaaggatctgatgcagnccgtcggcccgaccgtg
tcgatgacgnaccccgcctccggcgagcgcgacgagcggcgcatcggcgtgcccgaggtg
atcgactatttcggcgtgccgccggagaaagtcgtcgacgtgcaggcgctggccggcgac
tccaccgacaacgtgcccggcgcgccgggcgtcggcgtcaagaccgccgcccggctcatc
ggcgaatatggcgacctcgacgcgctgttggcgcgcgccggcgagatcaagcagcccaag
cgccgcgccacgctgaccgatcccgccgtcgtcgagaaaatccgcatctcgaaaaagctg
gtgtcgctggtcgacgacgtcgcggtcgtcacgcccctgaccgatctgcgcctcgtcgcc
cccgacgccaaangagcgatcgccttcatgaaggcgatggagttcaccaccgtgacgcgc
cgcgtcgccgagctttacgacgccgacgccggcgccatcgagcccgatccgaatttttcc
ggccccgccggctggcgcggacgcgacggcgaggcgctgtcgccgccgggcgaggcgctc
tcggccgcgccggcgcccgccagatccgccgcgccggcgcccgccgcgaaggtcgggcca
agcgaggcgccggcgagccgcgccggcgccgtcgccgcgcaggcgctggaggccgcccgc
acgccgccgatcgagcgcgcgctctacaagaccgtgtcgaccaaggccgagctggaggaa
tggatcgaggccgcgcgccgcaacggcgtcgtcgccttcgacaccgagaccgattcgctc
gatcccgtcacctgcagcctcgtcggcgtgtcgctcgcgaccgcgccgggcgaggcctgc
tacatcccgctcgcccaccgctccggcgaggccgacgatctgttcagcgacggtcccgct
ttgctgtccggccagatggcggagcgcgattgcctcgccttgctcaagccgctgctcgaa
gacgccgccgtgctgaaggtcgcccagaacgtcaaattcgacgagctggtgctggcacag
cgcgcaatcgcggtcgcgccctgcgacgacaccatgctgatgagctacgtgcttgactcc
ggcaagaacggccacggcatggacgaactggccgccctgcatctgggctggaagacgatc
tccttcggcgaggtcgccggcacggggcgcagcttcaagggcttcgaccgcgtcgccatc
gacaaggcgaccgaatattccgccgaggacgccgaggtgacgctgcgcctgtggatggcg
ctgaagccgcgcctggcggcggagggcgtcgccacggtctacgagcggctggagcggccg
ttgcccagcgtgctgcaacgcatggagcggcgcggaatcatggtcgaccgcgccattctc
gcgcgcctgtcgggcgaattcgcgcaggcgatggccgggctcgaacacgagattcacggc
ctcgccggcgagagcttcaatctcggctcgcccaagcagctcggcgacattctgttcggc
aagttcggcctgcccggcgccaagaagaccgcgaccggcgcctggtcgaccgccgccggc
gtgctggaggacctcgccgaacagggccacgacttgccggcgaagattctcgactggcgc
cagatggcgaagctgaaatcgacctacgccgacgcgctgccgacctatcaggacgacnga
gggcgcgtgcacacctcctattcgctcgcctcgacctcgacggggcggctgtcctcgtcg
gagcccaatctgcaaaacattcccgtccgcaacgagatgggccggaaaatccgcgccgcc
ttcgtcgcgccgaagggccgccttctgatgtcggccgactattcgcagatcgagctgcgc
ctgctcgcccatatcgccgacatcgcgcaactcaagcgcgctttcgcggacggtctcgac
attcacgcgatgaccgcgtcggagatgttcggcgtgccggtcgaaggcatgccgggcgag
gtgcgccgccgcgccaaggcgatcaatttcggcatcatctacggcatttccgcgttcggc
ctggccaaccagnccggcatttcgcgcgaggaggccggcgcctacatcaagaaatatttc
gagcgcttccccggcatccgcgactacatggaggcgaccaagcgtcaggccaaggccgac
ggcttcgtgacgacgatcttcgggcgcaagatgcacttcccgcgcatcgcctcgtcgaac
cccagcgaacgcgccttcaacgagcgcgccgccatcaacgcgccgattcaaggctccgcc
gccgacatcatccgccgcgccatgatccgcatggacgaggcgctggcgaaggcgggcgtg
aaatccgagatgctgttgcaggttcacgacgaactggtgttcgaggtggatgaatccgag
gtcgagaagaccatcgacgtcgcgcgcaagatcatggtcgacgcgccgcacccggccgtg
acgctcagcgtgcccttgcaggtcgacgcgcgggcggcgcgcaactgggacgaggcgcat
taa

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