Rhizobium sp. Kim5: Kim5_CH01643
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Entry
Kim5_CH01643 CDS
T05501
Symbol
rfbB
Name
(GenBank) dTDP-glucose-4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00521
Streptomycin biosynthesis
rhk00523
Polyketide sugar unit biosynthesis
rhk00525
Acarbose and validamycin biosynthesis
rhk00541
O-Antigen nucleotide sugar biosynthesis
rhk01100
Metabolic pathways
rhk01110
Biosynthesis of secondary metabolites
rhk01250
Biosynthesis of nucleotide sugars
Module
rhk_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
Kim5_CH01643 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
Kim5_CH01643 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
Kim5_CH01643 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
Kim5_CH01643 (rfbB)
00525 Acarbose and validamycin biosynthesis
Kim5_CH01643 (rfbB)
Enzymes [BR:
rhk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
Kim5_CH01643 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
ARQ57736
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Position
complement(1657888..1658940)
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AA seq
350 aa
AA seq
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MRILVTGGAGFIGSALVRHLVSEIGAEVLNVDTLTYAGNLASLKSVESAPNYQFLRADIC
DRAGMQEAFASFRPDIVMHLAAESHVDRSISGAADFIQTNIVGTFSLLDAARHYWDGLDA
RRKSDFRFLHVSTDEVYGSLDDEGLFEETTPYDPSSPYSASKAASDHLAIAWHRTYGLPV
VVSNCSNNYGPFHFPEKLIPLMILNALEDKPLPVYGNGANVRDWLYVEDHARALYTIASR
GRPGEKYNVGGRNERRNIDVVHRICAILDGVYRDKAPHARLITNVTDRPGHDARYAIDAT
KLESELGWKAQETFETGIEKTVHWYLENEWWWRPLRENVYSGERLGVFKG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatactggtcacgggcggagctggctttatcggatcggcattggtgcgccatctc
gtcagcgagatcggcgccgaggtgctgaatgtcgacacgctgacctatgccggcaatctg
gcatcgctgaaatccgtcgaatcggcgccgaactatcaattccttcgggccgacatctgc
gaccgcgccgggatgcaggaagcattcgcgtccttccgccccgatatcgtcatgcatctc
gcggcagagagccatgtcgaccgctcgatctcgggcgctgccgatttcattcagaccaac
atcgtcggcacattcagcctgctggatgccgcacggcactattgggatgggcttgacgct
cgccgcaagagcgacttccggtttctgcatgtctcgacggatgaggtctacggctcgctc
gacgacgagggcctcttcgaggagacgacgccatacgatccgtcctcgccctactccgca
tccaaggccgcgagcgaccatctggcaatcgcctggcaccgcacctacggcctgccagtc
gtcgtctccaattgctccaacaattacggcccattccatttcccggaaaagctcatcccg
ctaatgatcctgaacgcactggaggacaagcctcttccggtttacggcaatggcgcaaat
gtccgcgactggctctatgtcgaagaccatgcccgcgcgctctacacaatcgcatccaga
gggcgccccggagaaaaatacaatgtgggcggccgcaatgaacgcaggaacatcgatgtc
gttcaccgcatctgcgccattctcgacggcgtctaccgcgacaaggcaccgcatgcacgt
ctgatcaccaacgtcacggatcgccccggacacgacgcacgctatgcgatcgatgccacg
aaactcgaaagcgaactcggctggaaggcgcaagagaccttcgaaaccggcatcgagaag
accgtgcactggtacttggaaaacgaatggtggtggaggccgctgcgcgaaaacgtctac
tccggcgaacgcctcggcgttttcaaggggtga
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