KEGG   Rhizobium sp. Kim5: Kim5_CH01789Help
Entry
Kim5_CH01789      CDS       T05501                                 

Gene name
tuf-1
Definition
(GenBank) elongation factor Tu 1
  KO
K02358  elongation factor Tu
Organism
rhk  Rhizobium sp. Kim5
Brite
KEGG Orthology (KO) [BR:rhk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:rhk03012]
    Kim5_CH01789 (tuf-1)
   03029 Mitochondrial biogenesis [BR:rhk03029]
    Kim5_CH01789 (tuf-1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:rhk04147]
    Kim5_CH01789 (tuf-1)
Translation factors [BR:rhk03012]
 Eukaryotic Type
  Elongation factors
   Kim5_CH01789 (tuf-1)
 Prokaryotic Type
   Kim5_CH01789 (tuf-1)
Mitochondrial biogenesis [BR:rhk03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    Kim5_CH01789 (tuf-1)
Exosome [BR:rhk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Kim5_CH01789 (tuf-1)
  Exosomal proteins of breast cancer cells
   Kim5_CH01789 (tuf-1)
  Exosomal proteins of colorectal cancer cells
   Kim5_CH01789 (tuf-1)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 cobW RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID: ARQ57868
LinkDB All DBs
Position
1804958..1806133
Genome map
AA seq 391 aa AA seqDB search
MAKSKFERNKPHVNIGTIGHVDHGKTSLTAAITKYFGEFKAYDQIDAAPEEKARGITIST
AHVEYETPARHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLARQ
VGVPAIVVFLNKVDQVDDAELLELVELEVRELLSSYDFPGDDIPVVKGSALAALEDSDKK
IGEDAIRELMAAVDSYIPTPERPIDQPFLMPIEDVFSISGRGTVVTGRVERGIVKVGEEV
EIVGIRPTSKTTVTGVEMFRKLLDQGQAGDNIGALVRGVNRDGVERGQILCKPGSVKPHK
KFMAEAYILTKEEGGRHTPFFTNYRPQFYFRTTDVTGIVTLPEGTEMVMPGDNVTVAVEL
IVPIAMEEKLRFAIREGGRTVGAGIVASIVE
NT seq 1176 nt NT seq  +upstreamnt  +downstreamnt
atggcaaagagtaagtttgagcgcaacaagccgcacgtcaacattggcacgatcggccac
gttgaccacggcaagacgtctctgacggcagcgatcacgaagtacttcggtgagttcaag
gcgtacgaccagatcgacgcggctccggaagagaaggcgcgcggcatcacgatttcgacc
gcgcacgtcgaatatgagacgccggcccgccactacgcgcacgtcgactgccccggccat
gccgactacgtcaagaacatgatcaccggtgctgcccagatggacggcgcgatcctggtg
tgctcggctgctgacggcccgatgccgcagacgcgcgaacacattctgctggcccgccag
gttggcgttccggcgatcgtggtgttcctgaacaaggtcgaccaggttgacgacgccgag
ctgctcgaactggttgagctcgaagttcgcgaactgctgtcgtcctacgacttcccgggc
gacgacatcccggttgtcaagggttcggcgcttgccgctcttgaagatagcgacaagaag
atcggcgaagacgcgatccgcgagctgatggcagcggtcgactcctacatcccgacgcct
gagcgtccgatcgaccagccgttcctgatgccgatcgaagacgtgttctcgatctccggc
cgcggcactgtcgtaaccggccgcgtcgagcgtggcattgtcaaggttggcgaagaagtc
gagatcgtcggcatccgtccgacctcgaagacgacggtcaccggcgttgaaatgttccgc
aagctgctcgaccagggccaggccggcgacaacatcggcgcgctggttcgcggtgtgaac
cgtgacggcgtcgagcgtggccagatcctgtgcaagccgggttcggtcaagccgcacaag
aagttcatggctgaagcctacatcctgacgaaggaagagggcggccgtcatacgccgttc
ttcaccaactaccgtccgcagttctacttccgcacgacggacgtgaccggcatcgtcacg
ctgccggaaggcacggaaatggtcatgccgggcgacaacgtcacggttgccgtcgagctg
atcgttccgatcgcgatggaagaaaagctgcgcttcgccatccgcgaaggcggccgcacc
gtcggcgccggtatcgtcgcctcgatcgtcgagtaa

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