Rhizobium sp. Kim5: Kim5_CH01904
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Entry
Kim5_CH01904 CDS
T05501
Symbol
cpdB
Name
(GenBank) bifunctional 2',3'-cyclic nucleotide 2'-phosphodiesterase/3'-nucleotidase
KO
K01119
2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:
3.1.4.16
3.1.3.6
]
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk00230
Purine metabolism
rhk00240
Pyrimidine metabolism
rhk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
Kim5_CH01904 (cpdB)
00240 Pyrimidine metabolism
Kim5_CH01904 (cpdB)
Enzymes [BR:
rhk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.6 3'-nucleotidase
Kim5_CH01904 (cpdB)
3.1.4 Phosphoric-diester hydrolases
3.1.4.16 2',3'-cyclic-nucleotide 2'-phosphodiesterase
Kim5_CH01904 (cpdB)
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GFIT
Motif
Pfam:
5_nucleotid_C
Metallophos
PGA_cap
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
ARQ57975
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Position
complement(1908015..1910003)
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AA seq
662 aa
AA seq
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MSSIFDVGLMSRRSLLGGLAATSALVLLHPFSARANANQAHLRLMETTDIHVNVFPYDYY
ADKPNDTMGLSRTGTIIDNIRAEAANSLLIDNGDVLQGNPMGDYMAYQHGMKDGDVHPVI
KAMNTLGYTVGTLGNHEFNYGLDFMFKVLSGANFPFVCANLTKGQLASDPKQDDLFFKPY
IIVEKQIKDGAGKESPVNIGFIGFVPPQIMLWDIKNLEGKAQTRDIVEAAKAWVPAMKEA
GADIVIALSHSGIDGAAPSEKMENASLHLAAVEGIDAIFTGHQHLVFPGPKSWDGIANAD
PVKGTLHGKPAVMAGFWGSHLGLIDLLLEKDGNSWKIVDFTSEARPIYHRDDKKKVIADY
ADKKDVVEAAKAEHEATLAYVRTPVGKTSAPLYSYFALVADDPSVQVVSQAQTWYIKQML
ADTEYKDLPVLSAAAPFKAGGRGGADYYTDVPAGDIAIKNVADLYLYPNTVQAVAITGAQ
VKNWLEMSAGMFNHINAGTKDAPLLNSDFPSYNFDVIDGVTYQIDLSQPPKYDSSGKAIN
PDANRIQNLAFDGKPIDPAQKFVVVTNNYRAGGGGSFPEIAADKVIFQAPDTNRDVIVRY
VHEQGTINPSADANWTFKPLPGTTATFESGPKAKQFLAAVKSVKIEEAGDGADGFSKFRL
VL
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatttttgatgtcggtctcatgagccgccgttccctgcttggcggtctcgcc
gcgacttccgccctggtgctgctgcaccctttcagcgcccgtgccaacgccaatcaggcg
catctgcggctgatggaaacgaccgacattcacgtcaacgtcttcccttatgactattac
gccgacaagccgaacgacacgatgggcctgtcgcgcaccggaacgatcatcgacaatatc
cgtgccgaagcggccaactcgctgttgatcgacaatggcgacgtgctccagggcaatccg
atgggcgactacatggcctatcagcacggcatgaaggacggcgacgtccatcccgtgatc
aaggcgatgaacacgctcggctatacggtcggcacgctcggcaatcacgagttcaattac
ggcctcgacttcatgttcaaggtcctgtccggcgcgaacttccccttcgtctgcgccaac
ctgaccaagggccagctcgcctcggatcccaagcaggacgatctcttcttcaaaccctac
atcattgtcgaaaagcagatcaaagacggcgctggcaaggagagccctgtcaacatcggc
ttcatcggattcgtaccgccgcagatcatgctctgggacatcaagaacctcgaaggcaag
gcgcagacccgcgacatcgtcgaggccgccaaggcctgggttcccgccatgaaggaagcc
ggcgccgatatcgtcatcgcactctcccattccggcatcgacggagcggcaccgtccgaa
aagatggagaatgcctcgctgcatctcgccgctgtcgaggggatcgatgcgatcttcacc
ggccatcagcatctcgtcttccccggcccgaagagctgggacggcatcgccaatgccgat
cccgtcaaaggcacgctgcatggcaagcccgccgtgatggccggcttctggggttcgcat
ctcggcctcatcgacctgctgctcgaaaaggacggcaacagctggaagatcgtcgatttc
acctcggaagcgcggccgatctaccatcgcgacgacaagaagaaagtgatcgccgactac
gccgacaagaaggacgtggtcgaagccgccaaggccgagcacgaggcgacactcgcctat
gtccgcacgccggtcggcaagacctccgcaccgctctattcctatttcgcgctggtcgcc
gacgatccttcagtgcaggtcgtcagccaggcgcagacctggtacatcaagcagatgctg
gccgacaccgagtacaaggatctgccggtgctttcggccgcagctcccttcaaggccggc
ggccgcggcggcgccgactattataccgatgtcccggccggcgatatcgccatcaagaac
gtcgccgacctctatctttatccgaacacggtgcaggctgtcgcgatcaccggcgcccag
gtgaagaactggctggaaatgtcggccggcatgttcaatcacatcaacgccggcaccaag
gatgcgccgctgctcaatagcgacttcccgtcttacaattttgacgtgatagacggcgtt
acataccagatcgacctgtcgcagccgccgaaatatgattcgtccggcaaggcgatcaat
ccggatgccaaccgtatccagaacctagccttcgacggcaagccgatcgatccggcccag
aagttcgtcgtcgtcaccaacaattatcgcgccggcggcggcggcagtttcccggagatc
gctgccgacaaggtgatcttccaggcgccggacaccaaccgcgacgtcatcgtccgctac
gtccacgagcaaggtacgatcaatccgtcggccgatgcgaactggaccttcaagccgctg
ccgggcacgacggcgaccttcgaaagcggcccgaaggcgaagcagttcctcgctgcggtc
aagagcgtcaagatcgaggaggccggcgacggggccgacggattctcgaaattcaggctg
gtactttaa
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