Rhizobium sp. Kim5: Kim5_PD00049
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Entry
Kim5_PD00049 CDS
T05501
Name
(GenBank) dipeptide/oligopeptide ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rhk
Rhizobium sp. Kim5
Pathway
rhk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Kim5_PD00049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhk02000
]
Kim5_PD00049
Transporters [BR:
rhk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Kim5_PD00049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ARQ62057
LinkDB
All DBs
Position
pRetKim5d:45275..47200
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AA seq
641 aa
AA seq
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MQYARTLRRQVVSTVAAAILIGAGWAGAALGFQEAPELKALVDAGKLPPVDQRLPKEPLV
LTPLESVGAYGGTWRTATFGGGDSEIERSIGYTRLVRWNPEWTEVIPDIAKSVEVNANAT
EYTFTLRQGTRWSDGKPFTADDLVWWNENVLRNTKITPAAPNWLTAGGQTVRVEKIGDDK
VVFKFAAPNGLFLMNMATVRGSDILAAAPAHYLKQFHKDFNPDGIDALVKAAGATDWVQL
FNNKIGFPGRWRDLGRPTLDAWVLTAPYNGTTQVVAERNPYYAKVDTAGNQLPYFDRITI
DVMQDTQAIILKAISGEIDMQNRFIETTDARTVIVQNQQKGGYGLFIARPAWSNALLITL
NQTHKNPALRAAFSNKDFRIGLSHAINREELNQLIYAGQAKPYQAAPREGSALYDEKMAT
QYLEYNVDLANQYLDKAGLTKRDAEGFRLGQDGKRITFAIDALTGSPIQVDALEMIQRYW
RTVGIDMQPRPAERSLIFSRLQNNDNDGLGWVGGGGYDFLGLLDPKWYFPHEYESSFATA
WGLYYQNPKDPNAQEPSAAAKKQMDLYRQVQEAPTLDKQLAAMKELLAITRDEFYVIGTN
LEPDRVGIVKTNMHNVPKVIPSTSFYMTPGPAKPETFYYQQ
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacgcaagaactctacgacggcaggtcgtctcgaccgttgccgctgccatcctc
atcggtgcgggctgggccggcgccgcgctcggttttcaggaagcgccggaactcaaggca
ctcgtcgatgccggcaagttgccgccggttgaccagcggctgcccaaggagccgctggtg
ctcacgccgcttgaatcggtcggcgcctatggcggcacctggcgcacggccaccttcggc
ggtggggacagcgagatcgaacgttcgatcggttataccaggcttgtccgctggaacccg
gaatggaccgaggtgatcccagacattgccaagagcgtcgaagtcaatgcgaatgccacc
gaatatacgttcaccctgcggcaaggcacgcgctggtcggacggcaaaccctttactgcc
gacgatctggtctggtggaacgagaacgtgctgcgcaacaccaagatcacacccgctgcg
ccgaactggctgaccgcgggtggtcagaccgtcagggtcgagaagatcggcgacgacaag
gtggtcttcaaattcgccgcgccgaacggcctattcctgatgaatatggcgactgtgcgc
ggctccgatattctggctgcggcacccgcgcactacctcaagcagttccacaaggatttc
aaccccgatggcatcgacgccctggtgaaggcggcaggcgcaacagactgggtccagctc
ttcaacaacaagatcggatttcccggtcgctggcgcgatctcggccgcccgacgcttgat
gcctgggtattgacggcgccctataacggcaccacccaggtcgttgccgaacgcaatccc
tattatgccaaggtcgataccgcgggaaatcagctgccttatttcgatcgcatcaccatc
gacgtgatgcaggatacccaggcgatcatcctgaaggcgatcagcggcgaaatcgacatg
cagaaccgctttatcgagacgacggacgcccgcacggtcattgtgcagaaccagcagaag
gggggctacggcctgttcatcgcccggccggcatggtcgaacgcgctgctgatcacgctg
aaccagacccacaagaacccggcgttgcgcgcggccttctccaataaggatttccgcatc
ggcctcagccacgccatcaaccgcgaggagctcaaccagctgatctatgccgggcaagcc
aagccctatcaggccgcaccccgggaaggatcagcgctctacgacgagaagatggcgacg
caatatctggaatataacgtcgatctcgccaatcaatatctcgacaaggcgggcctgacc
aaacgcgacgccgaaggttttcgtctcggccaggacggcaagcggatcacttttgccatc
gacgccttgaccggaagcccgatccaggtcgacgccctcgagatgatccagcgctactgg
cggaccgtcggcatcgacatgcagccgcgcccggccgaacgctcgctgatcttctcgcgc
ctgcagaacaacgacaatgacggcctcggatgggtcggcggcggcggttacgatttcctc
ggcctgctcgatcccaaatggtattttccgcacgaatatgaatcgagcttcgcgacggcc
tggggcctatattaccagaaccccaaggatccgaacgcgcaggaaccaagcgctgccgcc
aagaagcagatggatctttaccggcaggtgcaggaagccccgacgctcgacaagcagctc
gccgccatgaaagaactgctggcgatcacccgtgacgagttctacgtgatcggcacgaac
ctggagccggatcgtgtcggcatcgtcaagaccaacatgcacaacgttccgaaggtcatc
cccagcacgtcattctacatgacgccgggaccggcgaagcccgagactttctactaccag
cagtaa
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