Rhizobium favelukesii: LPU83_2728
Help
Entry
LPU83_2728 CDS
T03046
Symbol
ddl
Name
(GenBank) D-alanine-D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00470
D-Amino acid metabolism
rhl00550
Peptidoglycan biosynthesis
rhl01100
Metabolic pathways
rhl01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LPU83_2728 (ddl)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LPU83_2728 (ddl)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
LPU83_2728 (ddl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
LPU83_2728 (ddl)
Enzymes [BR:
rhl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
LPU83_2728 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhl01011
]
Precursor biosynthesis
Amino acid ligase
LPU83_2728 (ddl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-ProteinID:
CDM58380
UniProt:
W6RDJ1
LinkDB
All DBs
Position
complement(2666780..2667706)
Genome browser
AA seq
308 aa
AA seq
DB search
MSRKHVAVLMGGFSSERPVSLSSGTACADALEAEGFQVTRIDVDRDVSAKLAALRPDVVF
NALHGPYGEDGTIQGVLEYLEVPYTHSGVLASALAMDKEKAKGVAAAAGVPVAQSEVINR
FAFPAEHPMKPPYVVKPVREGSSFGVVIVQEDQSHPPQIISSPDWRYGEEVLVERYVYGR
ELTCGVMGDQVLGVTEVVPLGHGFYDYDAKYVAGGSKHVIPAEISPNIYQKIQSLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEINTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCSR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcaagcatgtcgctgtcctgatgggcgggttttcctcggagaggccggtaagc
ctctcttccgggacggcgtgcgcggatgcccttgaggctgagggtttccaggtgacgcgg
attgacgtcgatcgcgatgtgtctgcgaagcttgctgcactgcgacccgatgtcgtcttt
aatgcgctgcatggcccctacggcgaggatggtacgatccagggcgtcctcgagtatctt
gaggttccctacacgcattccggcgtgctggcttcggcgcttgccatggacaaggagaag
gcaaagggcgttgccgccgccgcgggcgttccggttgctcaatcagaggtgatcaatcga
ttcgcctttccagccgagcatccgatgaagccgccctatgttgtgaagcctgtgcgtgag
ggctccagcttcggtgtggtgatcgtccaggaggatcaatcgcatccgccgcagattatc
agctctccggactggcgctacggcgaagaggttcttgtcgagcgttacgtctatggccgg
gagctgacttgcggtgtcatgggggatcaggtgcttggcgtgaccgaggtggtgccgctg
ggccatggcttctacgattatgacgccaagtatgtcgcaggtggatcgaaacacgtcatc
ccggcggaaatttcaccgaatatttaccaaaaaatacaatcattggcattaagggcgcat
caagcaattggttgccgtggcgtcagtcgctccgactttcgttacgacgatcgcttctcc
gaagatggcgaaattatctggctggaaatcaatactcagccgggcatgacgccaacctcc
ctggtgcccgaaatggctggtcatgccggctactcatttggtgaatttctccgttggatg
gtggaggacgcttcttgttctcggtga
DBGET
integrated database retrieval system
