Rhizobium favelukesii: LPU83_2813
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Entry
LPU83_2813 CDS
T03046
Name
(GenBank) DNA end-binding protein Ku
KO
K10979
DNA end-binding protein Ku
Organism
rhl
Rhizobium favelukesii
Pathway
rhl03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LPU83_2813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhl03400
]
LPU83_2813
DNA repair and recombination proteins [BR:
rhl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LPU83_2813
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
CDM58464
UniProt:
W6RCA7
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All DBs
Position
2760002..2760811
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AA seq
269 aa
AA seq
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MARQTYWKGYLKLSLVTAAVSLTPATTESNQLRFHVLNRKTKNRVESRYVDSVTRKPIAD
KDQARGYPRGEDDYVILEDKELDEVGLESTKTIDIDTFVPRGSIDWIWYDKPHFLTPEDK
VGTEAFCVIRESMNANDVVGIARLVLYRRERAVLLEPQGKGIILWTLHFGDEVRPPAATL
DSHSKVDDTVLSLMKKLVKDRTEEWQPAMVQDPIQKRLRAMIRAKQKSLVKATPPSSKGP
PPKPTGNVVNIMDALKKSLAKETGRPKSH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcagacctattggaagggctatctcaagctgtcactcgtcaccgccgcggta
tcgctgacgccggcgacaacggaaagcaaccagcttcgatttcatgttctgaaccgaaag
acgaagaaccgcgtcgaaagccgctacgtcgacagcgtcacccgcaagccgattgccgac
aaggatcaagcccgaggatatccgcgcggcgaggacgactacgtcattctcgaagacaag
gaactcgacgaagtcggcttggaaagcacgaagacgatcgatatcgatacgttcgtgccg
cgcggctcaatcgactggatctggtatgacaagccacattttcttaccccggaggacaag
gtcggcaccgaagctttctgtgtgatccgcgaatcgatgaacgcaaacgatgtcgttggc
atcgcccggcttgttctctaccggcgcgagcgggcagtcctgcttgagccgcagggcaag
ggcatcattctctggacgctgcatttcggcgacgaggttcgcccgccggcagcgacactg
gacagccacagcaaggtggatgacaccgtgctctccctgatgaagaagctggtgaaagac
cggaccgaggaatggcaaccggccatggtgcaggacccgatccagaaacggctgagagca
atgatccgagcaaagcagaaaagcctcgtcaaagcgacaccaccatcttccaaggggccg
ccaccgaaaccgacgggcaacgtcgtcaatatcatggacgcactgaagaaaagcctcgcc
aaggaaacaggccgtccgaaatctcactga
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