Rhizobium favelukesii: LPU83_3638
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Entry
LPU83_3638 CDS
T03046
Symbol
speF
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
rhl
Rhizobium favelukesii
Pathway
rhl00330
Arginine and proline metabolism
rhl00480
Glutathione metabolism
rhl01100
Metabolic pathways
rhl01110
Biosynthesis of secondary metabolites
rhl04148
Efferocytosis
Module
rhl_M00134
Polyamine biosynthesis, arginine => ornithine => putrescine
Brite
KEGG Orthology (KO) [BR:
rhl00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
LPU83_3638 (speF)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
LPU83_3638 (speF)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
LPU83_3638 (speF)
Enzymes [BR:
rhl01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
LPU83_3638 (speF)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
CDM59281
UniProt:
W6RYB6
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Position
complement(3595977..3597110)
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AA seq
377 aa
AA seq
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MTTQRIRDFLATRRPDGPCLVVDLDVVRDNFSAFRHAMPDSAIYYAVKANPAPEVLKLLA
NMGSNFDCASVAEIEMALNAGATAARISYGNTIKKERDVARAHALGVSLFAVDSHEEVEK
ISRAAPGARVFCRVLTDGEGAEWPLSRKFGCVPQMAVDVLVYAHQLGLESYGVSFHVGSQ
MTKVDAWDSALADAKRVFVQLAKQGIHLQMVNMGGGFPTKYLRDVPSAEAYGRAIYQSLR
NHFGNQLPKTIIEPGRGMVGNAGVIKTEVVLISKKSDNDAARWVFLDIGKFGGLAETMDE
AIRYPIRTERDGDEMEPCVIAGPTCDSADVLYEKNLYPLPISLSIGDEILIEGTGAYTTT
YSAVAFNGFEPLKAYVI
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcagcgcatccgcgactttctcgcaacccgacgtcccgatggtccctgcctg
gtggtcgacctcgacgtcgtgcgcgacaacttctctgctttccgtcatgcgatgccggac
agcgcgatctactacgccgtcaaggcgaacccggctcctgaagtcctgaagctgctcgcc
aacatgggttccaacttcgattgcgcgtctgtcgctgaaatcgaaatggcgctcaacgcc
ggtgcgacggctgcccgcatttcctacggcaacacgatcaagaaggaacgcgacgttgcc
cgcgcgcatgcgctcggcgtcagcctctttgcggtcgacagccacgaggaagtcgagaag
atctcgcgtgccgctcccggcgcccgcgtgttctgccgcgtcctgacggatggcgaaggc
gctgagtggccgctgtcgcgcaagttcggctgcgtgccgcagatggctgtcgacgttctc
gtctacgctcatcagctcggtctcgagtcctacggcgtgtcgttccacgttggttcgcag
atgaccaaggtcgatgcctgggattcggccctggccgatgccaaacgcgtcttcgtccag
ctggccaagcagggcatccacctgcagatggtcaacatgggcggcggcttcccgaccaag
tatctgcgcgatgttccatcggcggaagcttacggtcgtgcgatctaccagagcctgcgc
aatcacttcggcaaccagcttccgaagacgatcatcgaaccgggccgcggcatggtcggc
aatgccggtgtcatcaagacggaggtcgtgctgatctcgaagaagtcggacaacgacgct
gcccgctgggtgttcctcgacatcggcaagttcggcgggctcgccgaaacgatggacgaa
gccattcgttacccgatccgcaccgaacgtgacggcgacgaaatggagccttgcgtgatt
gccggcccgacctgcgactcggccgacgtgctgtacgaaaagaatctctatccgctgccg
atctccctatcgatcggcgacgagatcctgatcgaaggcaccggcgcctacacgaccacc
tattcggcggtcgcgttcaatggcttcgagccgctgaaagcctacgttatctag
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