KEGG   Rhizobium sp. N1341: AMJ98_CH01800
Entry
AMJ98_CH01800     CDS       T04420                                 
Symbol
nrdJ
Name
(GenBank) ribonucleotide-diphosphate reductase subunit alpha
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn00230  Purine metabolism
rhn00240  Pyrimidine metabolism
rhn01100  Metabolic pathways
rhn01232  Nucleotide metabolism
Module
rhn_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
rhn_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    AMJ98_CH01800 (nrdJ)
   00240 Pyrimidine metabolism
    AMJ98_CH01800 (nrdJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhn03400]
    AMJ98_CH01800 (nrdJ)
Enzymes [BR:rhn01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     AMJ98_CH01800 (nrdJ)
DNA repair and recombination proteins [BR:rhn03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    AMJ98_CH01800 (nrdJ)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N Ribonuc_red_lgN GrpE
Other DBs
NCBI-ProteinID: ANL09484
LinkDB
Position
complement(1808742..1812554)
AA seq 1270 aa
MRIERRFTKAGQGAYADIEFRKATSEIKNPDGSIVFRLENIDVPAQFSQVATDVLAQKYF
RKAGVPTRLKKVEENDVPSFLWRSVPDDAALKTLPKEEQTGSEIDARQVFDRLAGTWTYW
GWKGGYFSSEEDAAAFKDELAYMLATQRVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPF
TGKLTKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGSNFSMLRG
EGEKLSGGGRSSGLMSFLKIGDRAAGAIKSGGTTRRAAKMVVVDIDHPDIEEYINWKVKE
EQKVAALVTGSKIVAKHLKAIMKACFNCEGDNGDCFDPAKNPALKREIRTAKKDQVPENY
VQRVIQFARQGYKDLEFKTYDTDWDSEAYLTVSGQNSNNSVSIKDDFLRAVENDGEWKLT
ARKDGKVMKTLKARDLWETISYAAWASADPGIHFNTTMNDWHTSPAGGPIRGSNPCSEYM
FLDDTACNLASLNLLQFKDKATKRINIGDYEHAVRLWTVVLEISVMMAQFPSKRIAELSY
EYRTLGLGYANIGGLLMSSGIPYDSTEARAIAGSLTAIMTGICYATSAEIAGELGPFPNF
APNRESMLRVIRNHRRAAYGETSGYEALSIDPVALIHSENPDQDLAAHAKSAWDKALELG
EKHGYRNAQVSVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIINRAVPEALR
TLGYSESQIAEIEAYAVGHGNLNQAPAINPSTLKAKGLTDEKVEAVNAALKSAFDIKFVF
NQWTLGADFLKDTLKVSDEQLADMSFNLLDHMGFSKKDIEAANIHVCGAMTLEGAPFLKA
EHLPVFDCANPCGKIGKRYLSVESHIRMMAAAQPFISGAISKTINMPNEATVEDCKNAYM
LSWKLGLKANALYRDGSKLSQPLNASLIEDEDDEDALEELLQAPVAAQAVTITEKIIERV
IERVSREREKLPNRRQGYTQKAAVGGHKVYLRTGEFGDGRLGEIFIDMHKEGAAFRAMMN
NFAIAISLGLQYGVPLEEYVEAFTFTKFEPAGMVIGNDAIKNATSILDYVFRELAVSYLG
RHDLAHVDTSDFSNTALGKGIQEGKTNLLSTGWTRGYKPTLVSGTGGERQAGEPKGAATA
APARAASTGTVTAFAGSAARKLEPTVAVSTSEIVAFKRDYEERAKELAEEIAEEVSEEIT
SDATALFSDKAAADAATAKTEAKKVEAERRQRSIMQGYTGNMCSECQNFTMVRNGTCEKC
DTCGATSGCS
NT seq 3813 nt   +upstreamnt  +downstreamnt
atgcgcatcgaacgtcgtttcacgaaagccggccaaggcgcctatgcggatatcgaattc
cgcaaggcgacgagcgagatcaagaacccggacgggtcgatcgtcttccgcctcgagaat
atcgacgttcccgcgcagttctcccaggtcgcgaccgacgttctggcgcagaagtatttc
cgcaaggccggtgttcccacccggctgaagaaggtcgaggaaaacgacgttccctccttc
ctgtggcgctccgttcccgacgatgccgcgctgaagaccctgcccaaggaggagcagacc
ggctccgaaatcgatgcgcgccaggtatttgatcgtctcgccggcacctggacctattgg
ggctggaagggcggctatttctcttcggaagaagatgctgccgccttcaaggacgagctt
gcctatatgctcgccacccaacgcgtcgccccgaactcgccgcaatggttcaacaccggc
ctgcactgggcctacggcatcgacggccccggtcagggccatttctacgtcgatcccttc
accggcaagctgaccaaatccaagtcggcctacgaacatccgcagccgcatgcctgcttc
atccagtcggtcgaggacgacctcgtcaacgaaggcggcatcatggatctctgggtgcgt
gaagcgcgcctgttcaaatacggctccggcactggctccaatttctcgatgctgcgcggc
gaaggcgaaaagctttccggcggcggccgctcctccggcctgatgagcttcctgaagatc
ggcgaccgcgccgccggcgctatcaaatcgggcggcacgacgcgccgcgccgccaagatg
gtggtcgtcgacatcgaccatcccgatatcgaggaatacatcaactggaaggtcaaggaa
gagcagaaggttgcggctctcgtcaccggctccaagattgtcgccaagcacctgaaggcg
atcatgaaggcctgcttcaattgcgaaggcgacaacggcgattgcttcgacccggccaag
aaccctgccctgaagcgcgagatccgcaccgcgaagaaggaccaggttcctgaaaactac
gtccagcgcgtcatccagttcgctcgccagggctacaaggaccttgaattcaagacctac
gacacggactgggattcggaagcctacctcacggtatcgggccagaactccaacaactcc
gtctcgatcaaggacgacttcctgcgcgccgtggaaaatgacggcgaatggaagctgacc
gcccgcaaggacggcaaggtcatgaagacgctgaaggcgcgcgatctctgggaaacgatt
tcctatgccgcctgggcctcggccgatccgggcatccacttcaacacgacgatgaacgac
tggcacacctcgccggccggcggcccgatccgcggctcgaacccgtgctcggaatacatg
ttcctcgacgacacggcctgcaacctcgcctcgctgaacctcctgcagttcaaggacaag
gccaccaagcgcatcaatatcggcgactacgaacacgccgttcgcctgtggaccgtcgtg
ctggaaatctcggtgatgatggcgcagttcccgtcgaagcgcattgccgaactctcctac
gaataccgcacgctcggcctcggctacgccaatatcggaggcctgctgatgtcgtcgggc
attccctacgactccactgaggcccgcgccatcgccggttcgctgactgcgatcatgacc
ggcatctgctatgcgacctcggccgagatcgccggcgaactcggccccttcccgaacttc
gcgccgaaccgcgagagcatgctcagggtcatccgcaaccatcgccgcgccgcttacggc
gaaacctccggctatgaggcgctgtcgatcgatccggtcgcgctgatccattcggaaaac
cccgatcaggatctcgccgcccatgccaaatcggcctgggacaaggcgctcgagctcggc
gaaaagcacggctaccgcaatgcccaggtttcggtcatcgcgcccaccggcacgatcggc
ctcgtcatggattgcgacacgacgggcatcgagcccgacttcgccctcgtcaagttcaag
aagctcgccggcggcggctacttcaagatcatcaaccgcgccgtgccggaagcgctgcgc
acgctcggctattcggaaagccagatcgccgagatcgaggcctatgcggtcggccacggc
aacctgaaccaggcaccggcgatcaacccgtcgacgctgaaggccaagggcctgaccgac
gaaaaggtggaagccgtcaacgccgcgctgaagagcgccttcgacatcaagttcgtcttc
aatcagtggacgctcggcgccgacttcctgaaggacacgctgaaggtttccgacgagcag
ctcgccgatatgagcttcaacttgctcgaccacatgggcttctcgaagaaggacatcgaa
gccgccaacatccatgtctgcggtgcgatgacgctggaaggcgcgcccttcctcaaggca
gagcatctgccggtcttcgattgcgccaatccttgcggcaagatcggcaaacgctatctc
tccgtcgaaagccatatccgcatgatggcggctgcccagcccttcatctcgggcgcgatt
tccaagacgatcaacatgccgaacgaggcgaccgtcgaggattgcaagaacgcctacatg
ctgtcctggaagctcggcctcaaggccaacgccctctatcgcgacggctcgaagctgtcg
cagccgctcaacgcctcgctgatcgaagacgaggacgacgaggatgcgctggaggaactg
ctgcaggcgcccgtcgccgcccaggccgtcaccatcaccgagaagatcattgagcgggtg
atcgaacgggtttcgcgcgaacgcgagaagctgccgaaccgccgccagggttacacccag
aaggcggccgtcggcgggcacaaggtctatctccgcaccggcgagttcggcgacggccgc
ctcggcgagatcttcatcgacatgcacaaggaaggcgctgccttccgtgcgatgatgaac
aatttcgccatcgccatctcgctcggcctgcaatatggcgtgccgctcgaggaatatgtc
gaggccttcaccttcaccaagttcgagccggccggcatggtcatcggcaacgacgcgatc
aagaacgccacctcgatcctcgactacgtcttccgcgagcttgccgtctcctatctcggc
cgtcatgacctcgcgcatgtcgacacgtcggatttttcgaacacggcgctcggaaagggc
atccaggaaggcaagaccaacctgctctccaccggctggacccgtggctacaagccgacg
ctggtttccggcaccggcggcgaacgccaggcgggcgaacctaagggtgcggccaccgcg
gcccctgcccgcgccgcttccaccggcacggtcaccgcctttgccggcagtgctgcccgc
aagctggagccgacggttgccgtctccacctccgaaatcgtcgccttcaagcgcgattac
gaggaacgcgccaaggaattggccgaagagatcgccgaagaggtgagcgaggaaatcacc
agcgacgccactgccctcttctccgacaaggcggcagccgacgcggcaaccgccaagacc
gaagccaagaaggtggaagccgaacgccgccagcgctcgatcatgcaggggtacacgggc
aacatgtgctcggaatgccagaacttcacgatggtgcggaatggcacctgcgagaaatgc
gacacgtgcggtgcgacgagcggctgcagctga

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