KEGG   Rhizobium sp. N1341: AMJ98_CH03009Help
Entry
AMJ98_CH03009     CDS       T04420                                 

Gene name
ddl
Definition
(GenBank) D-alanine--D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rhn  Rhizobium sp. N1341
Pathway
rhn00473  D-Alanine metabolism
rhn00550  Peptidoglycan biosynthesis
rhn01100  Metabolic pathways
rhn01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rhn00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    AMJ98_CH03009 (ddl)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    AMJ98_CH03009 (ddl)
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    AMJ98_CH03009 (ddl)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhn01011]
    AMJ98_CH03009 (ddl)
Enzymes [BR:rhn01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     AMJ98_CH03009 (ddl)
Peptidoglycan biosynthesis and degradation proteins [BR:rhn01011]
 Precursor biosynthesis
  Amino acid ligase
   AMJ98_CH03009 (ddl)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp_4 ATP-grasp ATP-grasp_3 GARS_A CPSase_L_D2 Arg_repressor
Motif
Other DBs
NCBI-ProteinID: ANL10647
LinkDB All DBs
Position
complement(3036848..3037774)
Genome map
AA seq 308 aa AA seqDB search
MSRKHVAVLMGGFSSERPVSLSSGKACAEALEAEGFKVTTIDVARDVSEKLAALRPDVVF
NALHGPFGEDGTIQGILEYLEIPYTHSGVLASALAMDKDKAKRVAAAAGIPVAESQVINR
FAFPSIHPIKPPYVVKPVREGSSFGVVIVTEDQAHPPQVASSPEWRYGEEVLVERYVYGR
ELTCGVMGETALGVTEVVPQGHNFYDYDSKYAAGGSKHVIPAKISPNIYQKIQTLALRAH
QAIGCRGVSRSDFRYDDRFSEDGEIIWLEVNTQPGMTPTSLVPEMAGHAGYSFGEFLRWM
VEDASCLR
NT seq 927 nt NT seq  +upstreamnt  +downstreamnt
atgagtcgcaagcatgtcgctgtcctgatgggcggattttcctcggaaaggcctgtcagc
ctttcctcgggaaaggcttgcgcagaggccctcgaggccgaaggcttcaaggtaaccacg
atcgatgtcgcccgcgatgtttccgaaaagcttgccgcattgaggcctgatgttgtcttc
aatgcgcttcatgggccgttcggtgaggacgggaccatccagggcatcctggaatatctg
gagatcccgtacacgcattcaggtgtgcttgcctcggcgctggcaatggataaggacaag
gcgaagcgtgtcgctgccgccgccggcatccccgtcgccgaatcgcaggtcatcaaccgt
ttcgcctttccttcgatacatccgataaagccgccttatgtggtgaagcctgtgcgcgag
ggctcgagtttcggcgtcgtgatcgtcaccgaagatcaggcgcatccgccccaggtcgcc
agctcgcccgaatggcgctatggcgaagaggtgctggtcgaacgctatgtctacggccgc
gagctcacctgcggcgtcatgggcgaaactgcgctcggtgtcaccgaggtggtgccgcag
ggacacaatttttatgattacgattccaagtatgcggcgggcggttcaaaacacgtcatc
ccggcgaaaatttcaccgaatatttaccaaaaaatacaaacattggccctaagggcgcat
caggcaatcggttgtcgcggcgtcagtcggtccgactttcgttacgacgatcgtttctcc
gaagacggcgaaatcatctggctggaggtcaatacccagccaggcatgactcctacctcg
ctcgtgcccgaaatggccggtcatgccggctattcctttggtgagtttctccggtggatg
gtggaggacgcgtcttgtttgcgttga

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