Rhizobium sp. N1341: AMJ98_CH03206
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Entry
AMJ98_CH03206 CDS
T04420
Name
(GenBank) poly(A) polymerase domain-containing protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rhn
Rhizobium sp. N1341
Pathway
rhn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rhn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMJ98_CH03206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhn03019
]
AMJ98_CH03206
Enzymes [BR:
rhn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AMJ98_CH03206
Messenger RNA biogenesis [BR:
rhn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AMJ98_CH03206
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
DUF348
Motif
Other DBs
NCBI-ProteinID:
ANL10835
LinkDB
All DBs
Position
complement(3234785..3236038)
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AA seq
417 aa
AA seq
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MTGIADQAWFRDPALGRVLALLNADEGEGRVVGGAVRNSLMGLPVSDIDIATTLQPEIVM
ERAAAAGVKAVPTGLQHGTVTLVIDGKPFEVTTLRTDVETDGRHAKVAFSTDWKADAERR
DLTINALYADAGGEVVDLVGGLADIETRNIRFIGDAARRIAEDHLRILRFFRFFAYYGSG
RPDAEGLKACAAARSKLKTLSAERVWSELRKLLGAADPGRALLWMRQVAVLTEILPESER
WGIDAIPSLVATERALGWAPDPLLRLMAIVPPDAARLEALAARLKLSNAEAATLKAWATA
APVNDEISPAAFERLLYRNGPDGITTRLKLALAVARGKAEGDLGEMARSARLGKLMDQAA
NWKKPQFPLNGGDVLAAGVASGPRVGELLAVLENQWVEENFTSDRTALLARLQERAQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcattgccgaccaagcatggttccgcgatccggccctcggccgggtccttgcg
cttctcaatgccgatgagggggaagggcgagtggtcggcggcgcggtgcgcaacagcctg
atgggcctgccggtcagcgatatcgacatcgccacgacgctgcagcctgaaatcgtcatg
gagcgggcggcggcggccggcgtcaaggcagtgccgacaggattgcagcacggcacggtg
acgctcgtcatcgatggcaagcctttcgaggtgacgacgctgcgtaccgatgtggagacc
gatgggcgccacgccaaggtcgctttcagcaccgactggaaggccgatgccgaacggcgg
gatctgacaatcaacgcgctctatgcagatgccgggggcgaagtggtcgatctcgttggc
ggacttgccgatatcgaaacgcgcaacatccgcttcatcggcgatgcggcaaggcgtatc
gccgaggaccatctgcgcattctgcgcttcttccgtttttttgcctattacggctccgga
cggcccgatgcggagggcctgaaagcctgtgcggcggcgcggtcgaaactgaagacgctg
tcggccgaacgcgtctggtcggagctcagaaaactgctcggtgctgccgatcccggccgg
gcactcctctggatgcggcaggtggcggtgttgacggaaattctgccggaatcggaacgt
tgggggatcgatgccatcccttcgcttgtcgccaccgagagggcgctcggctgggcgccc
gatccgctgctgcgcctgatggcgatcgtaccacccgatgcggcgcggttggaggcgctt
gcggcccggctgaaactctccaatgcggaagcggccactctcaaggcctgggcgacggcg
gcgccggtcaacgacgaaatctcgccggccgctttcgaacggctactttaccgcaacggc
cctgacggcataacgacgcggctgaagctagcgcttgccgttgcgcgcggcaaggctgag
ggcgatcttggcgaaatggcgcgttcggcgcggctcggcaagctcatggatcaggccgcg
aactggaagaagccgcagtttcctctgaacggcggcgacgtgcttgcggcgggtgtcgca
tctggccctcgcgtcggcgaactgcttgcggtgctggaaaatcagtgggtggaggaaaat
ttcacctccgatcggacggcgctgctcgcccggctgcaggaacgagcgcaatag
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