Rhodobacter sp. LPB0142: LPB142_04555
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Entry
LPB142_04555 CDS
T04631
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
rhp
Rhodobacter sp. LPB0142
Pathway
rhp00260
Glycine, serine and threonine metabolism
rhp00630
Glyoxylate and dicarboxylate metabolism
rhp00785
Lipoic acid metabolism
rhp01100
Metabolic pathways
rhp01110
Biosynthesis of secondary metabolites
rhp01200
Carbon metabolism
Module
rhp_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
rhp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
LPB142_04555
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
LPB142_04555
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
LPB142_04555
Enzymes [BR:
rhp01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
LPB142_04555
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AOZ68677
UniProt:
A0A1D9MA14
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All DBs
Position
926799..929630
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AA seq
943 aa
AA seq
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MFKPTTYDSYDFANRRHIGPSPAEMEAMLAVVGTPSLEALIDETVPKSIRQKRPLSWAPL
TEHALLARLREVAAKNRVMTSLIGQGYYGTVTPPAIQRNILENPAWYTAYTPYQPEIAQG
RLEALLNFQTMVADLTGLEVANASLLDEATAAAEAMAMAERSAKSKARGFFVDLNLHPQT
IAVIETRAAPLGIEVIKGQPDDLVPEAVFGAIFQYPGTYGHVRDFTDLIEKLHDAKALAI
VATDLLALCLLKEPGAMGADIAVGSAQRFGVPMGYGGPHAAFMAVRDALKRAMPGRIVGV
SIDSHGDPAYRLSLQTREQHIRREKATSNVCTAQALLAVMAGFYAVFHGPAGLRAIAERV
HFNAVRLRDALLAAGAEVAPGAFFDTITVKVGVGQAGILAAARHRGLNLRKVGRDRVGIS
VDELTDADVIARALDAFGITDPAPAEVELGFPEAMLRQSDYLTHPVFHMNRAESEMMRYM
RRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPLTWPEFGALHPFAPYNQAEGYHEAIADL
TTKLCEITGYDAFSMQPNSGAQGEYAGLLTIAAYHRARGEGYRNICLIPVSAHGTNPASA
QMAGMQVVVVKSAPNGDIDLEDFNEKAVAAGENLAACMITYPSTHGVFEETVRAVCEITH
EHGGQVYIDGANMNALVGLVKPGEIGGDVSHLNLHKTFAIPHGGGGPGMGPIGVKEHLAP
FLPGHPETGGEEGAVSAAPYGSASILLISWAYCLLMGGAGLTQATRVAILNANYIAARLK
ASYPILFMGNRGRVAHECILDTRGFAEVGVTVDDIAKRLVDNGFHAPTMSWPVAGTLMVE
PTESETKAEIDRFITALEAIRAEIADVAEGRISAEDSPLRRAPHTVEDLVAEWDRPYSRE
QGCFPPGSFREDKYWPPVGRVDNVYGDRNLVCTCPPLEDYIAK
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atgttcaagccgacgacctacgacagctacgatttcgccaaccgccgccatatcggcccg
tcgcccgccgagatggaggcgatgctggcggtcgtcggcacgccctcgctcgaggcgctg
atcgacgagaccgtgccgaaaagtatccgccagaagcgcccgctctcctgggcgccgctg
accgaacatgcgctcttggcgcggttgcgcgaggtggcggcgaagaaccgcgtgatgacc
tcgctgatcgggcagggctattacggcactgtcacgccccccgcgatccagcgcaatatc
ctcgaaaacccggcctggtacaccgcctataccccctatcagcccgagatcgcgcagggc
cggctcgaggcgctgttgaacttccagaccatggtcgccgatctgaccgggctcgaggtc
gccaatgcgagcctcttggacgaggccaccgccgcggccgaggcgatggcgatggcggaa
cgctcggcgaaatcgaaggcgcgcggcttcttcgtcgatctcaacctgcatccgcagacc
atcgcggtgatcgagacgcgcgcggcgcctctgggtatcgaggtgatcaagggccagccc
gacgatctcgtccccgaggccgtcttcggcgcgatcttccaatatccgggcacctatggc
catgtccgcgatttcaccgatctgatcgaaaagctccatgatgccaaggccttggcgatt
gtcgcgacggatcttctggcgctgtgcctgctcaaggagccgggcgcgatgggcgccgat
atcgcggtcggctcggcacagcgctttggtgtgccgatgggctatggcggcccgcatgcg
gccttcatggcggtgcgcgatgcgctcaaacgcgcgatgcccgggcggatcgtcggcgtc
tcgatcgacagccacggcgacccggcctaccggctctcgctgcaaacccgcgagcaacat
atccgccgcgaaaaggccacctcgaacgtctgcacggcgcaggcgcttttggcggtgatg
gcggggttctacgcggtcttccacgggccggcggggctgcgcgcgattgccgagcgggtg
catttcaacgccgtgcggctgcgcgatgcgctgctcgcggcgggggccgaggtcgcgccg
ggggcgtttttcgacacgatcaccgtcaaggtcggcgtgggccaggccgggatcctcgcc
gccgcgcgtcaccgcgggctcaacctgcgcaaggtcgggcgcgaccgcgtcggcatctcg
gtcgatgagctgaccgacgccgatgtcatcgcccgtgcgctcgacgccttcggcatcacc
gacccggcgcccgccgaggtcgagctcggcttccccgaggcgatgctgcgccaaagcgac
tatctgacccacccggtcttccacatgaaccgcgccgaaagcgagatgatgcgctacatg
cgccgcctctcggaccgcgacctcgcgctcgaccgggcgatgatcccgctcggctcgtgc
acgatgaagctcaacgccgcggccgagatgatgccgctgacctggccggaatttggcgcg
ctgcacccgtttgcgccctataatcaggccgagggctatcacgaggcgatcgccgatctg
accacgaaactgtgcgagatcaccggctatgacgccttttcgatgcagcccaactccggc
gcgcagggcgaatatgcggggcttctgacgatcgcggcctatcaccgcgcgcgcggcgag
gggtatcgcaacatctgtctgatcccggtctcggcgcatggcaccaacccggcctcggcg
cagatggcggggatgcaggtcgtggtggtgaaatcggcgcccaacggcgatatcgatctc
gaggatttcaacgagaaggcggtcgcggcgggcgagaacctcgcggcctgcatgatcacc
tatccctcgacccatggcgtcttcgaggagacggtgcgggcggtttgcgagatcacccat
gagcatggcggccaggtctatatcgacggggcgaacatgaacgcgctcgtgggccttgtg
aaaccgggcgagatcggcggcgatgtgagccacctcaacctgcacaagaccttcgcgatc
ccgcatggcggcggcgggccggggatggggccgatcggcgtgaaggagcatctcgcgccg
ttcctgccgggccacccggagacgggcggcgaggagggggcggtctcggccgcgccctat
ggctcggcttcgatcctgctgatctcctgggcttattgtctgttgatgggcggggcgggg
ctgacccaggcgacgcgggtcgcgatcttgaacgcgaactatatcgcggcgcggctcaag
gcctcctatccgatcctgttcatgggcaaccggggccgggtggcgcatgaatgcatcctc
gatacgcgcggctttgccgaggtgggcgtgacggtggacgatatcgccaagcgtctggtc
gataacggttttcacgcgccgaccatgtcctggccggtggcggggacgctgatggtggag
cccaccgagagcgagaccaaggccgagatcgaccgcttcatcaccgcgctcgaggcgatc
cgggcggagattgcggatgtggccgaggggcggatctcggccgaggacagcccgctgcgc
cgcgcgccgcatacggtcgaggacctcgtcgccgaatgggatcggccctattcgcgcgag
cagggttgtttcccgccgggctcgttccgcgaggacaaatattggccgcccgtcgggcgc
gtcgataacgtctatggcgaccgcaacctcgtgtgcacctgtccgccgctcgaggattac
atcgcgaaatag
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