KEGG   Rhodococcus sp. p52: IM25_20640Help
Entry
IM25_20640        CDS       T05434                                 

Definition
(GenBank) D-alanine--D-alanine ligase A
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
rhq  Rhodococcus sp. p52
Pathway
rhq00473  D-Alanine metabolism
rhq00550  Peptidoglycan biosynthesis
rhq01100  Metabolic pathways
rhq01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:rhq00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00473 D-Alanine metabolism
    IM25_20640
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    IM25_20640
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    IM25_20640
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:rhq01011]
    IM25_20640
Enzymes [BR:rhq01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     IM25_20640
Peptidoglycan biosynthesis and degradation proteins [BR:rhq01011]
 Precursor biosynthesis
  Amino acid ligase
   IM25_20640
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp ATP-grasp_3 CPSase_L_D2 ATP-grasp_4 ATPgrasp_ST RimK
Motif
Other DBs
NCBI-ProteinID: AOD23690
UniProt: A0A1B2UHP6
LinkDB All DBs
Position
complement(4464958..4466058)
Genome map
AA seq 366 aa AA seqDB search
MPRTRVAVVFGGRSNEHSVSCISAGSILRNLDPEKYEVVPIGITPEGAWVLGDADPAGLA
AAGRELPVVAGDGSDLVLTADPTRGGDIVALDEGSYGRVLASVDVVFPVLHGAYGEDGTI
QGLLELADIPYVGPGVLASAAGMDKEFTKKLLAAEGLPVGFQIVLRPGTATLTEEQKPRL
GLPVFVKPARGGSSIGISRVADWAAFDDAVAKARQHDPKVIVESAIIGREVECGVLEFPD
GDVRASVVAEIRMPDTSDDHEAFYDFDTKYLDDVCEFDVPAKLDEETSDRIRELAVRAFR
ALDCHGLSRVDFFVTEDGPVINEINTMPGFTSISMYPRMWEATGVEYAELLSILVETALA
RGTGLR
NT seq 1101 nt NT seq  +upstreamnt  +downstreamnt
atgccccgaacccgggtggccgtcgtcttcggtggtcgcagcaacgaacattccgtctcc
tgcatctcggcagggagcatcctgcgcaacctggatccggagaagtacgaggtcgtgccc
atcggcatcactcccgagggcgcatgggtcctcggcgacgcggacccggccggcctcgcc
gcggccggtcgcgaactgcccgtcgtcgccggcgacggctccgatctcgtcctcaccgcg
gatccgacccgcggtggcgacatcgtcgccctcgacgagggctcctacggccgggtgctc
gcctcggtcgacgtggtgttcccggtcctgcacggcgcctacggcgaggacggcaccatc
cagggtctgctcgaactcgcggacatcccgtacgtcggtcccggggttcttgccagcgcc
gccgggatggacaaggagttcaccaagaaactgctcgcggccgaaggcctgcccgtcggc
ttccagatcgtcctgcgtcccggcaccgcgaccctcaccgaggagcagaagccccgcctc
ggcctgcccgtcttcgtcaagcccgcccgcggcggatcgtccatcggcatcagtcgcgtg
gccgactgggccgccttcgacgacgccgtcgcgaaggcccggcagcacgaccccaaggtc
atcgtcgagtccgcgatcatcggccgcgaggtggagtgcggcgtgctcgagttcccggac
ggcgacgtccgcgcgagtgtcgtcgccgagatccgcatgcccgacacctccgacgaccac
gaggcgttctacgacttcgacacgaagtacctcgacgacgtctgcgagttcgacgtcccg
gccaagctcgacgaggagacctccgaccggatccgcgaactcgcggtccgggcgttccgc
gccctcgactgccacggcctgtcccgcgtcgacttcttcgtcaccgaggacggaccggtg
atcaacgagatcaacacgatgcccggattcacctccatctcgatgtacccgcggatgtgg
gaggccaccggcgtggagtacgccgagctgctgtcgatcctggtggagacggcgctggcg
cggggcaccggcctgcgctga

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