Rhodococcus fascians PBTS 2: A3Q41_00358
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Entry
A3Q41_00358 CDS
T05030
Symbol
ripA_1
Name
(GenBank) Peptidoglycan endopeptidase RipA
KO
K21473
peptidoglycan DL-endopeptidase RipA [EC:3.4.-.-]
Organism
rhs
Rhodococcus fascians PBTS 2
Brite
KEGG Orthology (KO) [BR:
rhs00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rhs01002
]
A3Q41_00358 (ripA_1)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rhs01011
]
A3Q41_00358 (ripA_1)
Peptidases and inhibitors [BR:
rhs01002
]
Cysteine peptidases
Family C40
A3Q41_00358 (ripA_1)
Peptidoglycan biosynthesis and degradation proteins [BR:
rhs01011
]
Peptidoglycan biosynthesis and degradation
Endopeptidase
A3Q41_00358 (ripA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NLPC_P60
SLT_2
SLT
Motif
Other DBs
NCBI-ProteinID:
AMY21682
UniProt:
A0A143QGS1
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All DBs
Position
385495..386988
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AA seq
497 aa
AA seq
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MAGDPFAVIVAVIVSAAGAVAGTDAPAPLQNQAVKDQAAAVAAAAEDQGKTMSDQWADLM
GTMPEPAADVADRTLNDAAEGLHTAVEPMLPEMPTVAEIETPEAPTAVTPTAASPAVGMA
AGLTPAAITPSAPLPFSVFSSNAASSAVAGLATGALQFAGRTYTAADIATQTAFMASAEA
IRRALFPGLPITFTGINVGPIGLGAVGAITAFVPWLQKAGNICGGVKATTIAALYAAENG
FRYGPTAPVSSTGAQGPGQFMPGTWATYGKDYDGNGVVDVNSIGDSVMASGTMLCDIYGQ
VDGWKRDGKVSGDTTDLTLAGYNAGAGAVLRSGGMPSGSVDYETQTKPYVARIRATEAQF
AAILTPFAGLDLTGMGGRAVQLAMDYLGLPYVWGGGNINGPSGGGFDCSGLTSYALFKAS
GGKVTLPRTSETQWNVGTEVPMALAQPGDLLFGNWGAAGPGHVAIYMGNGQMVHAPTTGD
VVRVAPVFDGMRARHIL
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcaggcgatcccttcgcagtcatcgttgccgtcatcgtgtctgccgcaggcgcagtc
gccggaacggacgccccagctccactgcagaatcaggcggtgaaggatcaggcagccgcg
gtcgctgccgctgccgaggaccagggcaaaacgatgtccgaccaatgggcagacctgatg
ggcaccatgcccgaacccgccgccgacgtcgcagaccggaccctgaacgacgctgccgag
ggactgcacaccgccgtcgaaccgatgcttccggaaatgcccacggttgccgagatcgag
acgccggaagcgcccacagcagtgacgcccacagcagcgtcgcccgcagtgggaatggct
gcgggtctcacaccggcggcgatcacgccgagcgccccgctacccttcagtgttttttcg
tcgaatgcggcatccagcgccgtcgccgggctcgccaccggtgccctgcaattcgccggc
cggacgtacaccgccgccgacatcgcgacccagacggcgttcatggcgtcggccgaagcc
attcggcgagcactgttccccggtctacccatcacgttcaccggcatcaatgtgggcccg
atcggtttgggcgcagtgggagcgatcaccgcgttcgttccgtggttgcagaaggcaggc
aacatctgcggcggcgtcaaggccacaacgatcgccgcgctctatgccgcagagaacgga
tttcgatacggtccgacagctccggtatcgagcaccggagcacagggacccggccagttc
atgccaggaacctgggcaacctacggcaaggactacgacggcaacggcgtggtcgacgtc
aacagcatcggcgactcggtcatggcgtcgggaacgatgctgtgcgacatctacggacag
gtagacggctggaagcgcgacggcaaggtctcgggcgacacgacggacctgaccctcgcc
ggatacaacgccggagcgggcgcagtgttgcgctcgggcggaatgccttcgggatcagtc
gattacgagactcagaccaagccctacgtagcgcgcatccgggccaccgaggcccagttc
gcggccatcctcactccgttcgcggggctcgatctcaccggaatgggcgggcgggcagtg
caattggcgatggattacctgggcctgccgtacgtgtggggcggcggaaacatcaacgga
ccgtccggcggcggattcgactgctcgggcctgacgtcctacgcactgttcaaggcctcg
ggcggaaaggtcaccctgccgcgtacgtcggagacgcagtggaacgtgggcaccgaggtg
ccgatggccctcgcccagcccggcgatctactgttcggcaactggggcgcggcgggcccg
ggacacgtggcgatctacatgggcaacgggcagatggtgcatgcgcccaccaccggtgac
gtggtgcgggtggcaccggtgttcgacgggatgcgagcccgccacatcctctga
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