Pseudorhizobium banfieldiae: NT26_2495
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Entry
NT26_2495 CDS
T04765
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase rhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
3.6.4.13
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NT26_2495 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rht03019
]
NT26_2495 (rhlE)
Messenger RNA biogenesis [BR:
rht03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NT26_2495 (rhlE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_30
Helicase_RecD
UTP25
HEM4
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CCF20219
UniProt:
L0NH67
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Position
2426769..2428271
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AA seq
500 aa
AA seq
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MTNFHELGLAKQLVANLSTLGYDTPTPIQAEAIPHLLQGRDLIGLAQTGTGKTAAFGLPL
IEMLSKDPKRPDNRTTRTLILAPTRELVNQIAVNLKAYVRGMPLKVNSVVGGASINKQQQ
MLEKGTDILVATPGRLLDLIARKAIGLTTVRYLVLDEADQMLDLGFIHDLRKISKMVPKK
RQTLLFSATMPKAIAELAGDYLTDPIQVSVTPPGKAADKVEQYVHFVGGKNDKTELLKKT
LTANAGGRAIVFMRTKHTAEKLMKHLDQVGYSVASIHGNKSQGQRERALKGFRDGEIQTL
IATDVAARGIDIPDVTHVFNYDLPEVPDAYIHRIGRTARAGRDGIAIAFCTSEETGLLRD
IEKLMGIEIATASGERPEGLNRPARGNNNSRGGNRGRGNGQPAGGEGRPQQRKRPARKPF
FQSEGGEGRGDGQERGAQPQANRPARKDHRKGNASAAHGAHESGNQRSRNGHGRPAQKAS
GNPGPVRFGGGNEGRSRRPA
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
ttgacgaatttccatgagcttggcctcgccaagcagctcgtagccaacctttccaccctg
ggctacgacactccgacgccgatccaggctgaggctatcccgcatcttctccagggccgc
gacctcattggtctcgcccagaccggcaccggcaagacggccgccttcggcctgccgctc
atcgagatgctgtcgaaggaccccaagcgtcccgacaaccgcacgacgcgtactctgatc
ctcgcaccgactcgcgaactggtgaaccagatcgccgtcaacctgaaggcttatgtccgt
ggcatgccgctgaaggtcaattcggtggtcggcggcgcatccatcaacaagcagcagcag
atgctggaaaagggcaccgacatcctcgtcgcaacgcccgggcgcctgctggacctcatt
gcccgcaaggcgatcggcctgaccaccgtccgctatctcgtcctcgacgaggccgaccag
atgctcgacctcggcttcatccacgaccttcgcaagatctccaagatggtgccgaagaag
cgccagaccctgcttttctcggcgaccatgccgaaggcgattgccgaactggctggcgac
tacctgacggatccgatccaggtgtcggtgacgcctccgggcaaggctgccgacaaggtc
gagcagtacgtgcacttcgtcggcggcaagaacgacaagaccgagctcctgaagaagacg
ctgaccgccaatgccggtggccgggcgatcgtcttcatgcgcaccaagcatacagccgag
aagctgatgaagcatctcgaccaggtgggctattcggttgcctccatccacggcaacaag
agccagggccagcgcgagcgggcactgaagggtttccgtgacggggagatccagacgctg
atcgcgaccgacgtcgctgcccgcggcatcgacatccccgatgtcacccacgtcttcaac
tacgacctgccggaagtcccggatgcctatatccaccggattggtcgtacagcacgcgcc
ggtcgcgacggcatcgcgatcgccttctgcacgtcagaagaaaccgggctgctgcgcgac
atcgagaagctgatggggatcgagatcgccacggcctccggcgagcgcccggaggggctc
aatcgcccggcacgcggcaacaacaacagccgcggcggtaatcgcggtcgcggcaacggc
cagccggccggtggtgaaggacgcccgcagcagcgcaagcgtccggcccgcaagccgttc
ttccagtcggaaggcggcgaagggcgcggtgatggccaggagcggggcgcccagcctcag
gccaaccgcccggcccgcaaggaccaccgcaagggcaacgcttcggcagctcacggtgcc
cacgagagcggcaaccagcgcagccgcaacggccatggccgcccggcccagaaggccagc
ggcaaccccggtccggttcgcttcggcggcggcaacgaaggccgcagccgccgtccggcc
tga
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