Pseudorhizobium banfieldiae: NT26_3338
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Entry
NT26_3338 CDS
T04765
Name
(GenBank) Orn/DAP/Arg decarboxylase 2
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rht
Pseudorhizobium banfieldiae
Pathway
rht00300
Lysine biosynthesis
rht00470
D-Amino acid metabolism
rht01100
Metabolic pathways
rht01110
Biosynthesis of secondary metabolites
rht01120
Microbial metabolism in diverse environments
rht01230
Biosynthesis of amino acids
Module
rht_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NT26_3338
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NT26_3338
Enzymes [BR:
rht01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NT26_3338
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
CCF21061
UniProt:
L0NJQ5
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All DBs
Position
complement(3265781..3267013)
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AA seq
410 aa
AA seq
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MEQPATLDWWLERAAAEFGTPCYVYFMPQIRKRGRHLREAFAQQFTISFAVKSNPNGVLL
DRLRDVVDYLDISSAGEFRRALAAGWLPERMSFTGPGKTQAELLEVISGALGELVIESTR
EAIEANRIAARLKRRQKVLIRLSPTSIPKGFGDQMGGRPSPFGIDVEDCDEAILAIGKLE
WLDVTGFHIYAGTQGLKADAAVENYASFLDIFKTVCRRHGIVPDKLIFGSGLGVPYHPSD
VAIELERVGTQTVALFETLRGERRFRETKLILETGRYLVAEAGYFLTRVVSTKLSRGTCF
AVCDGGMNHNLPASGHFGMALHRNYRMHKVGGGGPVERVNLVGPLCTSIDRLGCDVDLPR
LNVGDIVALHNSGAYGPTASPVNFISHEPPLEILVDETGMVDVSDGARAA
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccggcgacgcttgactggtggctggagagggcggccgcggaatttgggacc
ccatgttatgtctacttcatgcctcagatcaggaaacgaggccggcatctacgcgaggct
ttcgcgcagcagttcaccatcagctttgctgtaaagagcaatccaaacggtgtcctcttg
gaccggctccgcgatgtcgtcgattatctcgatatctcctccgcaggggaattccgacgg
gctcttgccgcggggtggctgccggagcggatgagtttcacgggtccgggcaagacgcag
gcggagctcctggaagtcatttccggcgctcttggtgagcttgtcatcgaatcgacgaga
gaagcaatcgaagccaacaggatcgcagcacgattgaagcggcggcagaaggtgctgata
aggctatcgccgacgtcgattccaaagggttttggcgatcagatgggtggtcgaccctcg
cctttcggtatcgatgtcgaagattgcgatgaagccatactggccattggcaagcttgag
tggctcgatgtcacaggtttccacatctacgccggtacacagggcctcaaggcggatgcg
gcggtggagaattacgcaagcttcctggatatcttcaagacagtctgcaggcgtcatggc
atcgtgccggacaagcttatcttcggttccggcctgggcgtaccctaccatccttccgac
gtggcgatcgaactcgagcgcgtcgggacacaaacggtggcgctatttgagaccctgagg
ggcgagcgccgcttccgtgagactaagctgatactcgaaacaggccgctacctagtcgcc
gaggccggttatttcctcacccgcgtcgtctccaccaagctatcgcgcggtacgtgtttt
gccgtctgcgacggggggatgaaccataatctgccagcaagcggccactttggtatggcg
ttgcaccgcaactaccgcatgcacaaggttggtggtggagggccggtcgagcgggtcaac
ctggtcggtccgctatgcacgtcgatcgatcgtttggggtgcgacgttgaccttccccgg
ctcaacgtcggcgacatcgtcgctctacacaacagtggtgcatacggtcccaccgcaagt
cccgtcaactttatcagccatgagccgccgctagaaatcctggtagatgagactgggatg
gttgatgtcagtgacggggcccgggccgcctag
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