Rhizobium sp. NT-26: NT26_3496
Entry
NT26_3496 CDS
T04765
Gene name
sdhA
Definition
(GenBank) Succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase / fumarate reductase, flavoprotein subunit [EC:
1.3.5.1
1.3.5.4
]
Organism
rht
Rhizobium sp. NT-26
Pathway
rht00020
Citrate cycle (TCA cycle)
rht00190
Oxidative phosphorylation
rht00650
Butanoate metabolism
rht01100
Metabolic pathways
rht01110
Biosynthesis of secondary metabolites
rht01120
Microbial metabolism in diverse environments
rht01130
Biosynthesis of antibiotics
rht01200
Carbon metabolism
Module
rht_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rht_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rht_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rht00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
NT26_3496 (sdhA)
00650 Butanoate metabolism
NT26_3496 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
NT26_3496 (sdhA)
Enzymes [BR:
rht01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
NT26_3496 (sdhA)
1.3.5.4 fumarate reductase (quinol)
NT26_3496 (sdhA)
SSDB
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
DAO
FAD_binding_3
GMC_oxred_N
HI0933_like
Other DBs
NCBI-ProteinID:
CCF21218
UniProt:
L0NJF9
LinkDB
Position
complement(3422129..3423982)
AA seq
617 aa
MASITPIAQGTSQTGKAYTYVDHSYDVIVVGAGGAGLRATLGMAEQGFKTACITKVFPTR
SHTVAAQGGIAASLTNMTPDCWQWHLYDTVKGSDWLGDVDAMQYLAMEAPKAVYELEHYG
VPFSRNEEGKIYQRPFGGHMQNYGAGPPVQRTCAAADRTGHAILHTLYGQSLRNNAEFFI
EYFALDLIMSDDGRCTGVVAWNLDDGTIHRFAAKMVVLATGGYGRAYFSATSAHTCTGDG
GGMIARAGLPLQDMEFVQFHPTGIYGSGCLITEGARGEGGYLVNSEGERFMERYAPSAKD
LASRDVVSRCMTLEIREGRGVGKNKDHIFLHLDHLDPAVLHERLPGISESAKIFAGVDVT
REPIPVLPTVHYNMGGIPTNFWGEVLNADSANPERIAPGLMAVGEAGCASVHGANRLGSN
SLIDLVVFGRAAAIRAGEVIDRAAPVPALNTAACDKIMDRFDRLRNANGGTPTAVLRDKM
QRTMQEDAAVFRTQESLESGCRRMSSIWGELKDVKVTDRSMIWNSDLVETLELENLMANA
ITTVYGAEARKESRGSHAREDFTEGPFGGRDDVNWRKHTLAWVNEAGDVKLDYRPVHTEL
IADGIDPAKIEPKARVY
NT seq
1854 nt
+upstream
nt +downstream
nt
atggcatcgatcactcccattgcgcaggggacatcccagaccggcaaggcctatacctat
gtcgaccactcctatgacgtgattgtcgtgggcgccggcggcgcgggcctcagggcgacg
ctcggcatggccgagcagggctttaagacggcctgcatcaccaaggtcttcccgacgcgt
tcccacaccgtggctgcacagggtggcatcgccgcctcgctgaccaacatgacgccggat
tgctggcagtggcacctctacgataccgtcaagggctccgactggctgggcgatgtcgat
gccatgcaatatctcgccatggaagcgccgaaggctgtttacgagctggaacattacggc
gtgccgttttcccgtaacgaggaaggcaagatctaccagcggccattcggcggtcacatg
cagaactacggcgccggtccgccggtgcagcgcacctgcgctgccgcagaccgtacagga
cacgcgatcctgcacacgctctacggccagtcgctgcgcaacaatgccgaattcttcatc
gagtacttcgcgctcgacctgatcatgtcggacgacggccgctgcacaggggtcgtcgcc
tggaatctggacgacggcacgatccatcgcttcgccgccaagatggtggtgctggcaacc
ggtggttatggccgcgcctacttctcggcgacttccgcgcatacctgcaccggagacggt
ggcggcatgatcgcgcgtgccgggctgccgctgcaggacatggagttcgtccagttccac
ccgacaggcatctacggatccggctgtctgattaccgaaggcgcgcgcggcgagggcggc
tacctcgtcaactccgaaggcgagcgtttcatggagcgctatgcgccctccgccaaggac
ctggcctcgcgcgatgtcgtttcccgctgcatgacgctggagatccgcgaggggcgcggc
gtcggcaagaacaaggaccacatcttcctgcatctcgatcacctggatccggctgttctg
cacgaacgcctgccgggtatctcggagagcgccaagattttcgccggcgtcgacgtcacc
cgcgagccgatccccgtcctgccgaccgtgcactacaacatgggcggcatcccgacgaat
ttctggggtgaggtcctgaacgcggacagcgctaatccggagcggatcgctcctggcctg
atggcggtcggcgaggccggctgcgcgtcggttcatggtgcaaaccgtcttggttcgaac
tcgctgatcgaccttgtcgttttcggccgtgccgccgcaatccgggcaggcgaggtgatc
gaccgggcagcacccgtgccggcgctcaacactgccgcctgcgacaagatcatggaccgc
tttgaccgccttcggaacgccaatggcggaacgccgacagcggtgctgcgcgacaagatg
cagcgaaccatgcaggaagatgctgccgtcttccgcacgcaggagtcgctggaatccggc
tgccgccgcatgtcatcgatctggggagagctgaaggacgtcaaggtcaccgaccgctcg
atgatctggaattccgacctcgtggagacgctggagctggagaacctgatggcgaacgcc
atcaccaccgtctacggcgccgaagcacgcaaggaaagccgtggcagccacgcccgcgag
gactttacggaaggcccgttcggcggtcgcgacgacgtgaactggcgcaagcatacgctt
gcctgggtcaacgaagccggcgacgtgaagctggactatcgcccggttcatacggaactc
attgccgatggcatcgatcctgcgaagatcgagcccaaggcccgcgtctactga
DBGET
integrated database retrieval system
