Rhizobium sp. N731: AMK02_CH02644
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Entry
AMK02_CH02644 CDS
T04809
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rhx
Rhizobium sp. N731
Pathway
rhx03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AMK02_CH02644 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rhx03400
]
AMK02_CH02644 (uvrB)
DNA repair and recombination proteins [BR:
rhx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AMK02_CH02644 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMK02_CH02644 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
SWI2_SNF2
Microtub_bd
DUF87
AAA_16
UB2H
Motif
Other DBs
NCBI-ProteinID:
ANK86214
LinkDB
All DBs
Position
2633444..2636452
Genome browser
AA seq
1002 aa
AA seq
DB search
MAKAPKKSPTSNGFEEAPQSSFEGAPLSGSVADWVKQLEADAEASGVESQREIASKAGKH
RKKVENEARKHSEAVSVNKKATVSKTARGVSIGGSSDPKTRAAAGLNPVAGLDISLEDAG
SISPGGVTATVEALSKLIESGNPLHKNGKIWTPHRPARPDKSEGGITIRMDSEYKPAGDQ
PTAIRDLVEGLQNGDRSQVLLGVTGSGKTFTMAKVIEETQRPAVILAPNKTLAAQLYSEF
KNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSATRSLLERDDCI
IVASVSCIYGIGSVETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMDFTRGSFRVRG
DTIEIFPAHLEDAAWRISMFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTPRPTLN
GAIKAIKEELRLRLAELEKAGRLLEAQRLEQRTRYDIEMLEATGSCQGIENYSRYLTGRD
PGDPPPTLFEYIPDNAIVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCMDNRPL
RFEEWDAMRPDTIAVSATPGSWEMEQSGGVFAEQVIRPTGLIDPPVEVRSARTQVDDVLG
EIRETAAKGYRTLCTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIEIIRDLRLGAF
DVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVILYADNV
TGSMQRAMDETARRREKQMAYNLENGITPESVKAKISDILDSVYERDHVRADISGVSGKG
FADGGNLVGNNLQAHLNALEKSMRDAAADLDFEKAARLRDEIKRLKAVELAAMDDPMARE
EARNQEGGKRNGKANRESISPLVGEMSGRTEGGTTPSYFSKPTLDDMGPGTDTATPLFRK
PELDEMGRHVATPADNKSLFRRNTLDEMTVGRTEKPVTGHVPDKPDAARGTKRFSPLLEG
QPERDDDVRPVVRGRVGAGSYEEPGEQKRKGRTKGKTGRPGR
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atggccaaagctccgaaaaaatctccgacctcgaatggtttcgaggaagccccgcaatcg
tcctttgaaggcgcccccctctccggctccgtcgctgattgggtgaagcagcttgaagcc
gatgcagaagcctccggcgtcgagagccagcgcgagattgcctcgaaagcgggcaagcac
cgcaagaaggtggagaacgaagcacgcaagcattcggaagccgtcagcgtcaacaagaag
gcgacggtgagcaagaccgcgcgcggcgtctcgatcggcggttcctccgacccgaagacg
cgcgccgccgccggcctgaacccggtggcgggtctcgacatttcgctcgaggatgccggc
agcatctcgcccggcggtgtcaccgccaccgtggaggcgctgtcgaagctgatcgagagc
ggcaacccgctgcacaagaacggcaagatctggacgccgcaccgccctgcccgcccggac
aaatccgaaggcggcatcaccatccgcatggactcggagtacaagccggccggcgaccag
ccgacggcgatccgcgatctcgtcgagggcctgcagaatggcgaccgcagccaggtgctg
ctcggcgtcaccggctccggcaagaccttcaccatggccaaggtgatcgaggaaacgcag
cgcccggccgtcatcctggcgccgaacaagaccctggccgcccagctctattccgagttc
aagaatttcttccccgacaatgcggtggaatatttcgtttcctactacgattactaccag
ccggaagcctatgtgccgcgctccgacacctatatcgagaaggaaagttcgatcaacgag
cagatcgaccgcatgcgccactcggcgacgcgctcgctgctcgaacgcgacgattgcatc
atcgtcgcctcggtctcctgtatctatggtatcggctcggtcgagacctatacggccatg
accttccagatgaatgtcggcgaccgtctggaccagcgccagctgctggccgatctcgtc
gcccagcaatataagcgccgcgacatggatttcacccgcggctccttccgcgttcgcggt
gacaccattgagatcttccccgcccacttggaagacgcggcctggcgcataagcatgttc
ggcgacgagatcgacgccatcaccgagttcgatccgctgaccggccagaagaccggcgat
ctgaaatcggtgaagatctacgccaattcgcactatgtcaccccgcgcccgacgctgaac
ggcgccatcaaggcgatcaaggaggagctgcggctgcgcctcgccgaactggagaaggcc
ggccgcctcctggaggctcagcgcctggagcagcgcacccgctacgatatcgagatgctg
gaagccaccggctcctgccagggcatcgagaactattcgcgctacctcaccggccgcgac
cccggcgatccgccgccgacgctgttcgaatatatccccgacaacgccatcgtcttcatc
gacgaaagccatgtcaccgtgccgcagatcggcggcatgtatcgcggcgacttccgccgc
aaggcgacgctggccgaatacggcttccgcctgccctcctgcatggacaaccggccgctg
cgcttcgaggaatgggacgccatgcgccccgacacgatcgccgtctcggccacaccaggc
agctgggagatggaacagtcgggcggcgtcttcgccgaacaggtgatccgccccaccggc
ctgatcgacccgccggtcgaagtccgctccgcccgcacccaggtcgacgacgtgctcggc
gagatccgcgagactgcggccaagggctaccgcaccctctgcaccgtgctgaccaagcgc
atggccgaggacctgaccgaatatctgcatgagcagggcgtgcgcgtgcgctacatgcat
tccgacatcgacacgctggagcgtatcgaaatcatccgcgacctgcgcctcggcgctttc
gacgtgctcgtcggcatcaacctgctgcgcgagggcctcgacattcccgaatgcggcttc
gtcgccatcctcgacgccgacaaggagggcttcctgcgctcggaaacctcgctgatccag
acgatcggccgagccgcccgtaacgtcgacggcaaggtcatcctctatgccgacaacgtc
accggctccatgcaacgtgccatggacgagaccgcccgccgccgcgaaaagcagatggcc
tataacctcgaaaacggcatcaccccggaatcggtcaaggccaagatctccgacatcctc
gactccgtctacgagcgcgaccacgtccgcgccgacatctcgggcgtctccggtaaaggc
ttcgccgacggcggcaacctcgtcggcaacaacctgcaggcccacctcaacgcgctcgaa
aaaagcatgcgcgacgccgccgccgacctcgacttcgaaaaagccgcccgcctccgcgac
gaaatcaaacgcctcaaggccgtggaacttgcggcgatggacgatccgatggcgcgggag
gaagcccgcaaccaggaaggcggcaaaaggaacggaaaagccaaccgcgagtcgatctcc
ccccttgtgggggagatgtccggcaggacagaggggggtaccacaccctcctacttctcc
aaacccaccctcgacgacatgggcccaggcaccgacacggccaccccgctcttccgcaag
ccggaacttgacgaaatgggccgccacgtcgccacccccgccgacaacaagagcctcttc
cgccgtaataccctcgacgaaatgacagtcggccgcacggaaaagccggtgaccggccat
gtgcctgacaagccggacgccgccaggggcacgaagcggttctcaccactgctggaaggc
cagccagaacgcgacgacgatgttcggccggtggtgcgcggccgggttggcgccgggagc
tatgaggagccgggcgagcagaagcgcaaggggcggacgaaggggaagacgggccggccg
gggcggtaa
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