Rhizobium sp. N731: AMK02_CH03919
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Entry
AMK02_CH03919 CDS
T04809
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rhx
Rhizobium sp. N731
Pathway
rhx00300
Lysine biosynthesis
rhx00470
D-Amino acid metabolism
rhx01100
Metabolic pathways
rhx01110
Biosynthesis of secondary metabolites
rhx01120
Microbial metabolism in diverse environments
rhx01230
Biosynthesis of amino acids
Module
rhx_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rhx00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMK02_CH03919 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMK02_CH03919 (lysA)
Enzymes [BR:
rhx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
AMK02_CH03919 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF6003
Motif
Other DBs
NCBI-ProteinID:
ANK87440
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Position
3976075..3977343
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AA seq
422 aa
AA seq
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MNHFDYRDGILYAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADVDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAAGIPANRIMFSGVGKTPQEMDFALEAGIY
CFNVESEPELEILNQRAVNAGKRAPVSFRINPDVDAKTHAKISTGKKENKFGISWDRARA
IYAHAAKLPGIDVTGIDMHIGSQITELQPFDDAFKLLRDLVATLRADGHAIHHVDIGGGL
GVPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIVTEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVKGSDFHVIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgattaccgcgacggcatcctttacgccgagaacgtccccgttcccgag
atcgccaaggcggtcggtacgccgttctatgtctattccaccgcaacgctggagcgccac
tatcgcgtcttctccgaagccttcgccgatgtcgactcgatggtctgctacgcgatgaag
gcgaactcgaaccaagccgtgctgaagaccttgggacgcctcggcgccggcatcgacgtc
gtctcggaaggcgaactgcgccgtgcgcttgctgccggcattccggcgaaccgcatcatg
ttttcgggcgtcggcaagacgccgcaggagatggatttcgcgctagaggccggcatctac
tgcttcaatgtcgaatctgagcctgagctcgagatcctcaaccagcgcgccgtcaacgcc
ggcaagagagcaccggtctccttccgcatcaatccggatgtcgatgccaagacgcatgcg
aagatctcgactggcaagaaggaaaataagttcggcatttcctgggatcgcgcccgcgcc
atctatgcccatgccgccaagctgccggggatcgatgtcaccggcattgacatgcatatc
ggcagccagatcaccgagctgcagcccttcgacgacgccttcaagctgctgcgcgatctc
gtcgccacgttgcgtgccgacggccacgccatccatcacgtcgatatcggcggtggcctc
ggcgttccctataaggatgacaacaatccgccgccgctgcccgatgcctatgcggcgatc
gtcaagaaccagctgcgcggtctgaactgcaagatcgtcaccgaacccggtcgcctgatc
gtcggcaatgccggcattctcgtcaccgaagttctttatgtgaaggacggcggcgagaag
actttcgtcatcgtcgacggtgcgatgaacgacctcattcgcccgacgctctacgaggcc
tatcacgaaatccgtccggtgacgatttcggcggcaaacgcgccgcgcatccgcgccgat
gtggtcggccccgtttgcgagaccggcgattatctggcgctcgaccgcgaaatggcgatg
ccgaagcccggcgatctgatggccgtcagcactgccggcgcctatggcgccgtccaggcc
ggcacctataacagccgtctgctggtgcccgaggttctggtcaagggcagcgattttcat
gtgattcgcccgcgcaggacctatgccgagctgatcagcctcgattccgttccggcctgg
ctcgactag
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