KEGG   Rhodoferax koreense: RD110_01345Help
Entry
RD110_01345       CDS       T04721                                 

Gene name
gatB
Definition
(GenBank) aspartyl/glutamyl-tRNA amidotransferase subunit B
  KO
K02434  aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]
Organism
rhy  Rhodoferax koreense
Pathway
rhy00970  Aminoacyl-tRNA biosynthesis
rhy01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    RD110_01345 (gatB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03029 Mitochondrial biogenesis [BR:rhy03029]
    RD110_01345 (gatB)
Enzymes [BR:rhy01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.5  Carbon-nitrogen ligases with glutamine as amido-N-donor
    6.3.5.6  asparaginyl-tRNA synthase (glutamine-hydrolysing)
     RD110_01345 (gatB)
    6.3.5.7  glutaminyl-tRNA synthase (glutamine-hydrolysing)
     RD110_01345 (gatB)
Mitochondrial biogenesis [BR:rhy03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    RD110_01345 (gatB)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: GatB_N GatB_Yqey YqeY
Motif
Other DBs
NCBI-ProteinID: APW36017
UniProt: A0A1P8JQI4
LinkDB All DBs
Position
complement(289779..291239)
Genome map
AA seq 486 aa AA seqDB search
MTTTSKTSSLLVHGYEVVIGFETHAQLSTQSKIFSRASTAFGAEPNTQACAVDIALPGTL
PVMNKGAVERAIQLGLALGSTIAPRSVFARKNYFYPDLPKGYQISQFEIPVVQGGAVEFY
LGDEKKTVRLVRAHLEEDAGKSLHEDFVGQTGIDLNRAGTPLLEIVTEPDMRSSAEAVAY
AKELHKIVTWIGICDGNMQEGSFRCDANVSVRKPGEPLGTRREIKNLNSFKFMQQAIDYE
VRWQIEQLEDGHAIQQATVLFNPDTGETRAMRTKEDAADYRYFPDPDLPPLVVAPEWVER
VRAEMAELPRVMAARFVKDYGLSDYDAASLTQSKAMSAYFEAAAKASGQAKLASNWIMGE
ISRRLNAGELDIAQAPVDAGRLAQMLQRIADGTISNSAARQVFDVLWTDGGEVDTIIEAK
GLKQMNDSGALEAIVDEVIAANAKNVEEYRAGKDKAFNALVGQIMKASKGKANPTQVNEL
LKARLG
NT seq 1461 nt NT seq  +upstreamnt  +downstreamnt
atgacgaccacaagcaaaacaagcagcctgctggtgcacggctacgaagtcgtgatcggc
ttcgagacccatgcccagctctccacgcaaagcaagatcttcagccgcgcatcgaccgct
ttcggcgccgagccgaacacccaggcctgcgcggtcgacatcgcgctgccgggcacgctg
ccggtgatgaacaagggcgccgtcgaacgtgccatccagctcggcctggcgctgggctcc
accattgcgccgcgcagcgtgttcgcacgcaagaactacttctacccggacctacccaag
ggctaccagatcagccagttcgagatccccgtggtgcagggcggtgcggtcgagttctat
ctgggggacgaaaagaagaccgtgcgcctggtgcgcgcgcatctggaagaagacgccggc
aagtcattgcacgaggacttcgtggggcagaccggcatcgacctgaaccgcgcgggcacg
ccgctcttggagatcgtgaccgagcccgacatgcgctccagcgccgaggccgtggcctat
gccaaggaactgcacaagatcgtcacctggatcgggatctgcgacggcaacatgcaggaa
ggcagcttccgctgcgacgcgaacgtgtcggtgcgcaagcccggcgagcctctgggcacg
cgccgcgagatcaagaacctgaacagcttcaagttcatgcagcaggccatcgactacgag
gtgcgctggcagatcgagcaactggaagacggccacgccatccagcaggccacggtgctg
ttcaacccagacactggcgagacccgcgccatgcgcaccaaggaagacgcggcggactac
cgctacttccccgacccggacctgccgccgctggtggtggcgccggaatgggtggagcgt
gtgcgcgccgagatggccgagctgccgcgggtgatggcggcgcgtttcgtcaaggactat
gggctgtcggactacgacgccgcctcgctcacacagagcaaggcgatgagcgcgtatttc
gaagccgcggccaaggccagcggccaggccaagctggccagcaactggatcatgggcgag
atctcgcgccggctcaatgcgggcgagctggacatcgcgcaggcgcccgtcgacgccggg
cgcctggcgcagatgctccaacgcatcgccgatggcacgatctccaacagtgcggcacgc
caggtgttcgacgtgttgtggacggatggcggtgaagtggacaccatcatcgaggccaag
ggcctgaagcagatgaacgacagcggtgccctggaagccatcgtcgacgaagtcattgcg
gccaatgcaaagaacgtggaagagtaccgcgccggcaaggacaaggccttcaacgcgctg
gtcggccagatcatgaaggccagcaagggcaaggccaatccgacgcaggtcaacgagttg
ttgaaggcccgcttgggctag

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