KEGG   Rhodoferax koreense: RD110_05670
Entry
RD110_05670       CDS       T04721                                 
Name
(GenBank) alpha-ketoglutarate-dependent dioxygenase AlkB
  KO
K03919  DNA oxidative demethylase [EC:1.14.11.33]
Organism
rhy  Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rhy03400]
    RD110_05670
Enzymes [BR:rhy01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.33  DNA oxidative demethylase
     RD110_05670
DNA repair and recombination proteins [BR:rhy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   Direct repair
    RD110_05670
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 2OG-FeII_Oxy_3
Other DBs
NCBI-ProteinID: APW36742
UniProt: A0A1P8JSK6
LinkDB
Position
1177263..1177913
AA seq 216 aa
MTLDLFPGEPAPAIEAIGAEACVLRGFALPEVALLLAGIEALQAEAGWRNMETPSGFTMS
VAMSNFGPLGWVTNRRGYSYTEIDPLSGRPWPALPASFARLATEAAAAAGFVGFRPDACL
VNRYLPGSRLSLHQDRNERDYGAPIVSVSLGMPAVFLFGGLARSDRAARIPLVHGDVVVW
GGVDRLRFHGVLPMKDQPHPLLGSQRINLTFRKAGS
NT seq 651 nt   +upstreamnt  +downstreamnt
atgacgctcgatctttttccaggcgaaccggccccggctatcgaggccatcggcgccgag
gcctgcgtgttgcgcggcttcgccttgccggaggtcgcgctgttgctggctggtatcgaa
gccctgcaggccgaggccggttggcggaacatggaaacgccgagcggcttcaccatgtcg
gtggccatgtccaacttcggccccttgggctgggtcacgaaccggcgcggctacagctat
accgagatcgacccgctgagcggtcggccctggcctgcgctgcccgcgtcgttcgcgcgg
ctggccactgaagccgcagcggctgccggcttcgtgggcttccggcccgatgcttgcctg
gtgaaccgttacctgccgggcagcaggctttcattgcaccaggaccgcaacgagcgggac
tacggcgcacccatcgtttcggtctcgctgggcatgcccgcggtgttcctgttcggcggc
ctggcgcgcagcgaccgcgccgcgcgcatcccgctggtccatggcgacgtggtggtctgg
ggcggcgtggaccggctgcgtttccatggcgtgttgccgatgaaggaccagccgcatccg
ctgctcggcagccagcgcatcaacctcacgttccgcaaggcgggttcgtag

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