KEGG   Rhodoferax koreense: RD110_10235
Entry
RD110_10235       CDS       T04721                                 
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
rhy  Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:rhy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rhy03019]
    RD110_10235
   03009 Ribosome biogenesis [BR:rhy03009]
    RD110_10235
Messenger RNA biogenesis [BR:rhy03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     RD110_10235
Ribosome biogenesis [BR:rhy03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    RD110_10235
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: APW37519
UniProt: A0A1P8JUT3
LinkDB
Position
2187102..2187710
AA seq 202 aa
MAEPNTPSTTGLTPEPKHLAKSDQNLIWLDCEMTGLDPDNERLIEIAVVVTGPSLEPRIE
GPVLVIHQSDAQLDKMDAWNKGTHGRSGLIDKVKASTLTEAEAEQQLIDFIKQYVPKGKS
PMCGNTIGQDRRFLVKYMPRLEAFCHYRNLDVSTLKELAKRWRPEVAAAFKKKQKHTALA
DVHESIEELAHYREHFLRLTPS
NT seq 609 nt   +upstreamnt  +downstreamnt
atggccgaaccgaacaccccgagcaccaccggcttgacgccggaacccaaacaccttgcc
aaatccgaccagaacctgatctggctcgactgcgaaatgaccggcctcgatccggacaac
gaacgcctcatcgaaatcgccgtggtcgtcaccggccctagcctcgagccccgcatcgaa
ggcccggtgctggtgatccaccagtccgacgcccagctcgacaagatggacgcgtggaac
aagggcacgcatggccgcagcgggctgatcgacaaggtcaaggcctccaccctcaccgag
gccgaggccgagcagcagctcatcgatttcatcaagcaatacgtacccaaaggcaagtcg
ccgatgtgcggcaacaccatcggccaggaccggcgcttcctcgtgaaatacatgcccagg
ctcgaggccttctgccattaccgcaacctggacgtgagcacgctcaaggagctcgccaag
cgctggcggcccgaggtggcggcggcgttcaagaagaagcagaagcacacggcgctggcc
gacgtgcacgagtcgatcgaggagctcgcgcattaccgcgaacattttttgcggctcacg
ccgtcctga

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