Rhodoferax koreense: RD110_10235
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Entry
RD110_10235 CDS
T04721
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rhy
Rhodoferax koreense
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rhy03019
]
RD110_10235
03009 Ribosome biogenesis [BR:
rhy03009
]
RD110_10235
Messenger RNA biogenesis [BR:
rhy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RD110_10235
Ribosome biogenesis [BR:
rhy03009
]
Eukaryotic type
Pre-60S particles
RNases
RD110_10235
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Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
APW37519
UniProt:
A0A1P8JUT3
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All DBs
Position
2187102..2187710
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AA seq
202 aa
AA seq
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MAEPNTPSTTGLTPEPKHLAKSDQNLIWLDCEMTGLDPDNERLIEIAVVVTGPSLEPRIE
GPVLVIHQSDAQLDKMDAWNKGTHGRSGLIDKVKASTLTEAEAEQQLIDFIKQYVPKGKS
PMCGNTIGQDRRFLVKYMPRLEAFCHYRNLDVSTLKELAKRWRPEVAAAFKKKQKHTALA
DVHESIEELAHYREHFLRLTPS
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccgaacaccccgagcaccaccggcttgacgccggaacccaaacaccttgcc
aaatccgaccagaacctgatctggctcgactgcgaaatgaccggcctcgatccggacaac
gaacgcctcatcgaaatcgccgtggtcgtcaccggccctagcctcgagccccgcatcgaa
ggcccggtgctggtgatccaccagtccgacgcccagctcgacaagatggacgcgtggaac
aagggcacgcatggccgcagcgggctgatcgacaaggtcaaggcctccaccctcaccgag
gccgaggccgagcagcagctcatcgatttcatcaagcaatacgtacccaaaggcaagtcg
ccgatgtgcggcaacaccatcggccaggaccggcgcttcctcgtgaaatacatgcccagg
ctcgaggccttctgccattaccgcaacctggacgtgagcacgctcaaggagctcgccaag
cgctggcggcccgaggtggcggcggcgttcaagaagaagcagaagcacacggcgctggcc
gacgtgcacgagtcgatcgaggagctcgcgcattaccgcgaacattttttgcggctcacg
ccgtcctga
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