Rhodoferax koreense: RD110_13275
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Entry
RD110_13275 CDS
T04721
Symbol
dppD
Name
(GenBank) dipeptide ABC transporter ATP-binding protein DppD
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
rhy
Rhodoferax koreense
Pathway
rhy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RD110_13275 (dppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rhy02000
]
RD110_13275 (dppD)
Transporters [BR:
rhy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RD110_13275 (dppD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
nSTAND1
AAA_16
AAA_29
AAA_22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
APW38043
UniProt:
A0A1P8JWC4
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Position
2846265..2847326
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AA seq
353 aa
AA seq
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MSALPSSIEAMPASSARLEVSGLSTSFATDAGRIQSVADVSFTIHPGETLALVGESGSGK
SVTSLTLMGLHAKTSQAQVTGEAWFVQRDGRRVDLLAMPEAQKRSLRGNELAMIFQEPMT
SLNPVLTVGEQIAESARLHLGMDRAKAHAHARRMLELVEIPAAAQRVNEYPHQLSGGMRQ
RVMIALAMACHPTLLIADEPTTALDVTIQAQILALMGRLQKETGMSMLFVTHNLGVVAQY
ADAVAVMYAGRIVESARVHDLFARPEHPYTKGLLACLPGVARQKERHEGAAHVGRRKLVA
IPGQVSSPLAPPPGCAFAPRCNRKLPACDAAMPTLEAAGPRRMVRCINREVNP
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctttaccttcctccattgaggcgatgccggcgtcgtcggcccgcttagaagtc
agcggcctttcgacctcgttcgccaccgacgccggccgcatccagagcgtggccgacgtg
tcgttcaccatccatcccggcgagacgctggcgctggtcggcgaatcgggctcgggcaag
tccgtcaccagcctcacgctgatgggcctgcatgccaagacctcgcaggcgcaggtcacg
ggcgaagcctggttcgtgcagcgcgacggccggcgcgtcgacctgctggccatgccggaa
gcgcagaaacgttccctgcgcggcaacgaactggcgatgatcttccaagagccgatgacc
agcctgaacccggtgctgacggtcggcgagcagatcgccgaatcggcgcggctgcacctc
gggatggaccgcgccaaggcccacgcacacgcgcggcgcatgctggaactcgtcgagata
ccggccgccgcgcagcgtgtgaacgagtatccgcaccagctctcgggcggcatgcgccag
cgcgtgatgatcgcgctggccatggcatgccacccgacgctgctgatcgccgacgaaccg
accaccgccctcgacgtcaccatccaggcgcagatcctggcgctgatgggccggctgcag
aaggaaacgggcatgagcatgttgttcgtcacgcacaacctgggcgtggtggcgcaatac
gccgacgccgtggccgtgatgtacgcaggccgcatcgtcgagtcggcacgcgtgcacgac
ctgttcgcccggccggagcatccttacaccaagggcctgctggcctgcctgccgggcgtg
gcgcggcagaaggaacggcatgagggtgcggcccacgtcggccggcgcaagctggtggcg
attcccggccaggtgtcgagcccgctggcgccgccacccggttgcgccttcgcgccgcgc
tgcaaccgcaagctgcctgcctgcgacgcggccatgccaacgcttgaagcggctggcccc
cggcgcatggtgcgctgcatcaaccgcgaggtgaatccatga
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