Rhodoferax koreense: RD110_24550
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Entry
RD110_24550 CDS
T04721
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
rhy
Rhodoferax koreense
Pathway
rhy00020
Citrate cycle (TCA cycle)
rhy00630
Glyoxylate and dicarboxylate metabolism
rhy01100
Metabolic pathways
rhy01110
Biosynthesis of secondary metabolites
rhy01120
Microbial metabolism in diverse environments
rhy01200
Carbon metabolism
rhy01210
2-Oxocarboxylic acid metabolism
rhy01230
Biosynthesis of amino acids
Module
rhy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rhy_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
rhy_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
rhy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RD110_24550
00630 Glyoxylate and dicarboxylate metabolism
RD110_24550
Enzymes [BR:
rhy01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
RD110_24550
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Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
HTH_17
MerR_1
MerR
HTH_Tnp_1
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
APW39982
UniProt:
A0A1P8K1T8
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Position
5307610..5308788
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AA seq
392 aa
AA seq
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MASWISMNEACEQLGVRPQTIYAYVSRGKLEVTPDPTDTRRSLYRAEDVTNLAKRKQAGR
KHETLAANTLFGSEPSIPTALCAFFRGRPYYRGQDAIGLARSANVEEVAQLLWDAGQPID
FAAPPSARSTRPARPGPGRVAAFTALAGLAADGHSTRGRLTRVLHNEGQGLVGQLANAFG
AQPGREPLHLRFAQGWKLQPEVAELLRTAMVLLVDHELTSSAFVARITASTGASLPACLL
AGLSTLSGPLHGDASGRVQALFSEVERLGEDRVLAHYLSTGMPLAGFGHHLYPDGDPRAA
ALLALFEPPEVIARFIEQATQLTGLQPNIDVALAALVAHHRLPADAAFGLFATARSVGLL
AHSLEQLGVAQVIRPRGRYVGPVPELAQGARN
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcttcctggatttcgatgaacgaggcgtgcgagcaactgggtgtgaggccgcagacg
atctacgcctacgtgagccgcggcaagctcgaagtcacgcccgacccgaccgacacccgc
cgcagcctgtaccgcgcggaagacgtgaccaatctcgccaagcgcaagcaggctggccgc
aaacacgagaccctcgctgcgaacacgctgttcggctcggagccgagcatcccgacggcg
ctgtgcgcgttcttccgtggacgcccttattaccgcggccaggacgccatcggcctggcc
cgttcggccaacgtggaagaagtggcccaattgctgtgggatgcgggtcaacccatcgac
ttcgccgccccgccctccgccagatccacgcgtcctgcccggcctggcccgggccgggtc
gccgcattcacggccctggccggactggcggccgacgggcattccacacgcggccggttg
acccgggtgctgcacaacgaagggcagggcctggtgggccagttggccaacgccttcggc
gcacagcccgggcgcgaaccgctgcacctgcgctttgcacaaggctggaaactgcaaccc
gaggtggccgaattgctgcgcacggccatggtcctgctggtcgaccatgagttgacgagt
tccgccttcgtcgctcgcatcacggcctcgacgggcgcctcgctgccggcttgcctgctg
gccgggctcagcacgctctcgggaccgctgcacggcgatgcctccggccgggtgcaggcg
ctgttcagcgaagtggaacgcctcggcgaagacagggtgctggcccattacctgtccacc
ggcatgccgctggccggcttcggacaccacctctaccccgacggcgacccgcgcgcggcg
gccctgctggcgctgttcgaaccgccagaggtgatcgcgcgcttcatcgagcaggcgacg
caactcaccggcctgcagcccaacatcgacgtggccctggccgcgctggtggcgcaccac
cggctgccagccgatgcggcgttcggcctgttcgccaccgcgcgcagcgtcgggctgctg
gcgcacagcctggagcaactgggcgtggcgcaggtgatccggccgcggggacggtatgtg
ggaccggtgccggaactggcgcagggggcccggaactga
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