Candidatus Riesia sp. GBBU: AOQ88_00815
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Entry
AOQ88_00815 CDS
T04782
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
rig
Candidatus Riesia sp. GBBU
Brite
KEGG Orthology (KO) [BR:
rig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rig03019
]
AOQ88_00815
03009 Ribosome biogenesis [BR:
rig03009
]
AOQ88_00815
Messenger RNA biogenesis [BR:
rig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AOQ88_00815
Ribosome biogenesis [BR:
rig03009
]
Eukaryotic type
Pre-60S particles
RNases
AOQ88_00815
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DUF4543
Motif
Other DBs
NCBI-ProteinID:
ARC54793
UniProt:
A0A1V0HPR3
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All DBs
Position
176438..176983
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AA seq
181 aa
AA seq
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MSNKNRNLIWIDLEMTGLDPDKNRIIEIATIVTDENLSVLCNGLDIVINQSNTQLSIMDK
WNINTHTKNGLIEEVKSSVINEKTAENFTISFLKNWVNKKCSPMCGNNVYQDRLFLKKYM
PSLEEYFHYRYIDVSSIKELLSRWNPDLSIEYAKKYKHRALSDIKESILELNYYRNNFIK
H
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataaaaatcgaaacctaatttggatagatttagaaatgaccggattagatcca
gacaaaaaccgaattatagaaatagctactatagttactgatgaaaatctttctgtatta
tgtaatggattagacatagtaataaatcagtctaacacacaactatcaataatggataaa
tggaacattaatacccatactaaaaatggactgatagaagaggttaaatctagcgtaatt
aatgagaaaactgcagaaaattttacaatatcttttttaaagaattgggtaaataaaaaa
tgttctccaatgtgtggtaataatgtctatcaggatagacttttcttaaaaaaatatatg
ccaagtctagaagaatattttcattacagatacatagatgttagttccataaaagaatta
ttatctagatggaatccagatttatctatagaatatgcaaaaaaatataaacatagagct
ctttcagacattaaagagtcaattttagaactaaattattatagaaataatttcataaaa
cattag
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