Roseburia intestinalis M50/1: ROI_24980
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Entry
ROI_24980 CDS
T02598
Name
(GenBank) Spermidine/putrescine-binding periplasmic protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
K11070
spermidine/putrescine transport system permease protein
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
ROI_24980
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rim02000
]
ROI_24980
Transporters [BR:
rim02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
ROI_24980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
CBL09461
UniProt:
D4KRF9
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All DBs
Position
2517198..2518253
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AA seq
351 aa
AA seq
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MKKYIVFPLLLLGAFFAAGCGTKNTADDNSLVVLNYGKYMDSSVLKLFEQETGIHVKLEE
YESPEEMYTKYKAGSIGYDLICTSDYMVERLISEGEVNKIDFSSFSNYQNIDPSIIDAAR
IFDPDASYSMPYFYGTLGILYNTTMVTDDEVSSWNILWDEHYKDSIIMQNSVRDSFVPAL
RLLNYDINTENETELNNAVDLLIKQKPLVYAYYVDETSDEMAAGNAAMALVYSGEAATAM
ELNDDLSYTVPKEGSNLWIDSWFIPKSCKNQENAEKFLDFLCREDVAMKNFDYVCYATPN
LAVIDALDDETLSDTTIFPPQETLDNCTVYKQFDESTTSLYSYLWKKLKSE
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaatatattgtttttccgcttttacttctcggcgctttttttgccgcaggctgt
ggaacaaaaaataccgctgacgataattcgctggtcgttttaaattatggaaaatatatg
gacagttctgttttaaaactgtttgaacaggaaaccggcatccatgttaaattagaagaa
tatgaaagcccggaggaaatgtatacgaaatataaagccggttcgatcggttatgactta
atctgcacttccgactatatggtagaacgtctgatctcggagggcgaagtaaataagatc
gacttcagcagtttttcgaattaccaaaatattgatccgtcgatcatcgatgcggcaagg
atctttgacccggatgcctcttactccatgccctatttttacggaacgctcggcatcctc
tacaataccacgatggtcacagatgatgaggtgtcctcctggaatatcctgtgggatgaa
cactacaaagattccatcattatgcagaattctgtccgtgattcgtttgtcccggctctt
cgcctgttaaattatgacatcaatacagaaaacgagaccgagctgaataatgccgttgat
cttctgatcaaacaaaaacctcttgtgtacgcctattatgtggatgagacttccgatgaa
atggctgccggaaatgcggcaatggcattagtttattccggggaagcagccactgcgatg
gaattaaatgatgacctctcctatacggttccaaaagaaggttccaacctctggatcgat
tcctggttcattccaaagagctgtaaaaatcaggaaaatgctgaaaaatttctcgatttc
ctatgccgtgaggacgttgccatgaaaaattttgattatgtctgctatgccacaccaaac
cttgctgtgattgatgcacttgacgatgagactctgagtgataccaccattttcccgcca
caggaaacactggataactgtaccgtgtacaaacagtttgatgaatccacaacttcgctt
tacagctatctctggaaaaaattaaaatccgaataa
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