Roseburia intestinalis M50/1: ROI_37780
Help
Entry
ROI_37780 CDS
T02598
Name
(GenBank) Beta-galactosidase
KO
K12308
beta-galactosidase [EC:
3.2.1.23
]
Organism
rim
Roseburia intestinalis M50/1
Pathway
rim00052
Galactose metabolism
Brite
KEGG Orthology (KO) [BR:
rim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
ROI_37780
Enzymes [BR:
rim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
ROI_37780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_42
Glyco_hydro_42M
DUF2194
Glyco_hydro_42C
Helicase_C_3
ABC_transp_aux
Motif
Other DBs
NCBI-ProteinID:
CBL10553
UniProt:
D4KJM3
LinkDB
All DBs
Position
complement(3779718..3781784)
Genome browser
AA seq
688 aa
AA seq
DB search
MKTEKLYFGAAYYSEYLPYDRVEKDMEMMEKAGMNVIRIAESTWSTLEPQEGVYDFTHID
RMLDAAACHHISVIVGTPTYAVPTWLVKKYPDILAITQNGRERYGHRQNMDITNPDYLSH
AERVIRVLMEHVKDVPHVIGYQLDNETKSYGTAGPHVQAMFVDYLKENFPDINDFNHEFG
LDYWSNRVNDWDDFPDVRGTINQSLAAEFCKFQRSLVTKFLSWQADIVREYKRDDQFITQ
NFDFDWTTHSIGYQSQVDQYDASRCMTVAGADIYHPSNEELTGAEITVCGNISRSLKKDN
YLILETEAQGLTPWLPYPGQLRLQAYSHIANGSNSVMYWHWHSIHNAIESYWKGVLSHDF
SENETYREAVVIGNEWNKIGSHLKNLKKENKIAIMLDNASLTGFTQFPLEKAGANGYNTV
MRWFSDALYRLNIEYDMISSREQDFSGYECLIVPALYSAPESLLLALDSYVRNGGHLITT
FRSGFSDEYLKIYPDMQPHILHECLGLHYDQFTHPHHVDIVPVQSDVMAAAQEHFSHPDD
SAFSLTSSACEWMELITCDTAVPVLKYSHPAYERYAAAAKNQYGNGSTLYFGTMFENDEL
LESVLLSFLHETGFSGGDLSSDAPHYPLIVKRGINDSGKELCYYLNYSKDPVSVTHHGKN
GVELISEAAIVCGDKIDLGGWGVAVVEM
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacagaaaaactttattttggagctgcatactattccgaataccttccatacgac
cgtgtggaaaaggatatggaaatgatggaaaaagcaggaatgaatgtcatccgtatcgcg
gaatcaacatggagtactttagagccgcaggaaggtgtgtatgattttactcatatcgac
agaatgttagacgctgccgcatgccaccatatttccgtgatcgtcggaacaccgacctat
gccgtaccgacatggctggtaaaaaaatatccggacatcctggcaatcacccagaacggc
cgcgaacgatatggccaccgccagaatatggatatcacaaacccggattatctctcccat
gcagagcgtgtgatccgtgttctgatggaacatgtaaaggatgtgccgcatgtgatcggc
tatcagcttgacaatgagaccaaaagttatggaactgccggtccccatgtccaggcaatg
tttgtagattatttaaaagaaaattttccggatatcaatgattttaaccatgagtttgga
ctggattactggagcaaccgtgtgaatgactgggatgatttcccggatgtcagaggtacg
atcaaccagagtcttgccgctgaattttgtaaatttcagcgttcacttgtcactaaattt
ttgagctggcaggctgatattgtccgcgagtacaaacgggatgatcagtttatcacacaa
aattttgattttgactggaccacacactcgatcggttatcagtcccaggtcgaccagtac
gatgcctcacgctgcatgacagtggctggtgccgatatttaccatccttctaatgaggaa
ctgaccggtgcagaaattaccgtatgtggaaatatctcacgcagtctgaaaaaggacaat
tatctgatcttagagaccgaggctcagggactgactccgtggcttccttatccgggacag
ctccgcctgcaggcatacagccatatcgcaaacggctcaaacagtgtgatgtactggcac
tggcattcgatccacaatgcaattgaaagttactggaaaggtgtgctctcccacgatttt
tctgaaaatgagacttaccgtgaagctgtcgtgatcggaaacgaatggaataagatcggt
tctcatttaaaaaacctgaaaaaagaaaacaagatcgccattatgcttgataatgcctcg
ctgaccggattcacccagtttccgcttgaaaaagccggagccaacggttacaacactgtg
atgcgctggttttcagatgccctctaccgcttaaatattgagtacgatatgatttcttct
agggaacaggatttttccggctatgaatgtctgatcgtaccggcactctacagtgcaccg
gaatctctgcttctggcattagattcctatgtcagaaacggcggacatctgatcaccaca
ttccgaagcggtttttccgatgaatatttaaagatttatccggacatgcagccacatatc
ctgcatgaatgtctgggacttcactacgatcagtttacacacccgcatcatgtggatatc
gtgccggttcaaagcgatgtcatggcggctgcacaggagcatttttcacatccggatgac
tctgccttttccctgacctcctccgcctgtgaatggatggagcttatcacctgtgatacc
gctgtaccggtattaaaatacagccatccggcatatgaacgctatgccgctgctgcaaaa
aatcaatatggaaatggttccacactttattttggaacgatgtttgaaaatgatgaactg
ttagaatccgtgcttttatctttcctgcacgaaaccggcttttccggtggagatctttcc
tcagatgcaccgcattatccactcattgtaaaaagaggtatcaatgattccggtaaagaa
ttgtgctactatctgaactattcaaaggatccggtttctgtcacacaccacggaaaaaac
ggcgtagagctgatttcagaagcagccatcgtctgtggagataaaattgacctaggcgga
tggggtgttgctgtggttgaaatgtaa
DBGET
integrated database retrieval system