Candidatus Riesia pediculicola: RIEPE_0183
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Entry
RIEPE_0183 CDS
T01218
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
rip
Candidatus Riesia pediculicola
Pathway
rip04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
rip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
RIEPE_0183 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rip03016
]
RIEPE_0183 (trmU)
Enzymes [BR:
rip01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
RIEPE_0183 (trmU)
Transfer RNA biogenesis [BR:
rip03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
RIEPE_0183 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
NAD_synthase
ThiI
ATP_bind_3
QueC
Asn_synthase
PAPS_reduct
Arginosuc_synth
Motif
Other DBs
NCBI-ProteinID:
ADD79687
UniProt:
D4G7Z1
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All DBs
Position
183631..184722
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AA seq
363 aa
AA seq
DB search
MKNKKNYVARVVVGMSGGVDSSVAALLLKKRNYEVLGLFMKNWEEDDGHSCSYIEDLKDV
KSVCEKLKIQLYQVNFSIEYWNKVFKVFLKKYKTGKTPNPDVLCNKEIKFKEFLDFSLEN
LNADYIATGHYVRKKKRNEKYILLKAKDERKDQSYFLHLLDQSQLEKVIFPIGEFKKSEI
RKIAEKNGLLSVSKKKDSTGICFIGKKRFENFLQKYISCKNGDILSVHKEIIGQHPGSIL
YTLGQRKGIRIGGIKNEKHGPWYVIDKNVKQNTIMISQNKFHPSLVSKGIIINNVHWISE
PKYRCSVQTRYHQKETYCSIRKICLNRISVRFDHPILSVTPGQYGVFYDREVCLGGGEID
LKF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataagaaaaattatgtagcaagagtagtagtaggaatgtctggaggagtagac
tcttcagttgcagctcttctactaaaaaaaagaaattatgaagttttaggattgttcatg
aaaaattgggaagaagatgatggtcattcgtgttcttacattgaagatttaaaagatgtg
aaatctgtttgcgaaaaactaaaaatacaactatatcaggtgaacttttcaatagaatac
tggaataaagtttttaaagtctttcttaagaagtataaaactggaaaaacaccaaatcca
gatgttttatgtaataaagaaattaaatttaaagaatttttagacttttctttagaaaat
ttaaatgcagattatattgcaaccgggcattatgttagaaaaaagaaaagaaatgaaaaa
tatattttgttaaaagcaaaagatgaaagaaaagatcaaagctattttttacatctactc
gatcaatctcaacttgaaaaagtcatttttccaattggagaatttaaaaaatctgaaatt
cgtaaaattgctgaaaaaaatggattattgagtgtatcgaaaaagaaagattcaacagga
atatgttttataggaaaaaaaagatttgaaaactttcttcagaagtatatttcttgtaaa
aatggagatattttatcagttcataaggaaattattggtcaacaccctgggtctatcttg
tatactttaggacaaagaaaaggaatcaggattggcggaataaaaaatgagaagcatgga
ccatggtatgtaatagacaaaaatgtcaaacagaacactattatgatttctcaaaataaa
tttcatccatctttagtttcaaaaggaattataataaataatgttcattggatatctgaa
ccaaagtatcgatgcagtgttcagactagatatcatcagaaagaaacttattgttcgata
aggaagatttgccttaatagaatatcagttcgcttcgatcacccaattttatcagtcact
cctggtcagtatggagtattttacgatcgagaagtttgtttaggaggtggagagatagat
ttaaaattttaa
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