Agrobacterium pusense IRBG74: BN877_II1199
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Entry
BN877_II1199 CDS
T02867
Symbol
soxA2
Name
(GenBank) sarcosine oxidase, alpha subunit
KO
K00302
sarcosine oxidase, subunit alpha [EC:
1.5.3.24
1.5.3.1
]
Organism
rir
Agrobacterium pusense IRBG74
Pathway
rir00260
Glycine, serine and threonine metabolism
rir01100
Metabolic pathways
Module
rir_M00975
Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:
rir00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
BN877_II1199 (soxA2)
Enzymes [BR:
rir01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.3 With oxygen as acceptor
1.5.3.1 sarcosine oxidase (formaldehyde-forming)
BN877_II1199 (soxA2)
1.5.3.24 sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
BN877_II1199 (soxA2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCV_T
SO_alpha_A3
Fer2_4
GCV_T_C
Pyr_redox_2
FAD_oxidored
DAO
FAD_binding_2
NAD_binding_8
HI0933_like
AlaDh_PNT_C
GIDA
Thi4
FAD_binding_3
Fer2_BFD
Lycopene_cycl
Motif
Other DBs
NCBI-ProteinID:
CDI10990
UniProt:
U4Q0X9
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All DBs
Position
linear:1232969..1235929
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AA seq
986 aa
AA seq
DB search
MSGDYRIKGAGRLTPARTARFTFDGKIYPALEGDTVASALLANGVHLIGRSFKYHRPRGF
LSAGPEEPNALIDVSRDSLRKQPNVRATVQEVFDGAIIASQNRFPSLSFDLSAINDLLSP
MFAAGFYYKTFMWPKAAWHKIYEPLIRRAAGLGKAPSEPDADHYSGRYAHCDVLVAGAGV
AGLTAALSAAKTGASVILVDENADVGGALRFDAGAVIDGLAGYEWAQKVFAELKSLPNVR
VLTRTTAFGYYNHNFVALAERVTDHLATPAKHQPRERLWQVRAKKVVLAAGAIERHMVFA
NNDRPGIMLASAARTYLNHYGVAVGHNVGVYTAHDSAYETAFDLKKAGVKIAAIVDCREN
PDQRLLDEARALGIEVLAGHSVYNTAGRLRVSSMTVGRNGGSNKRKIAIDALVVSAGWTP
SVHLFSQSRGKLKFDAANQRFLPDIHVQNCVSIGACNGTDDLSALIAEAAAAGGGAVAFS
GENARAWTGGMIGAAEGAGEGTGVKAFIDFQHDVCAKDIRLAVREGMHSVEHIKRFTTNG
MASDQGKMSNMHGLAIASEALGRDLPKVGLTTFRQPYTPVTFGTLINHSRGTLFDPARKT
PMHDEELAAGAVFEDVGNWKRAWFFPRAGEDMHEAINRECKTVRDSVGMFDASTLGKIEV
VGPDAAKFLNLIYTNAWDTLKPGRCRYGIMTREDGFVYDDGVVGRLAEDRFHVTTTTGGA
PRVLQHMEDYLQTEFPDLNVWLTSATEQWAVIAVQGPKAREVIAPFVEGIDLSPEAFPHM
AVAEGKFCGVPTRLFRVSFTGELGFEINVPADYGAAVWSAIRERAEAVGGCLYGTETMHI
LRAEKGYIIVGQDTDGTVTPDDAGLAWAVSKKKTDFVGIRGLKRPDLTRSGRKQLVGLKT
KDRLTVPDEGGQIVADPNQPKPMTMLGHVTSAYWSENLGHSIAFALVADGRARMGETLYI
PLADKTIAVEVTDMVFLDKEGARLNG
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcgattatcgtatcaagggcgcaggccgtctcacgccggcgagaaccgcgcgc
tttacctttgacggcaagatctatccggcgctggagggcgacaccgtcgcgtcagccctt
ctggccaatggcgtgcatctgatcggccgctcgttcaaatatcaccgtccgcgtggtttc
ctgtcggccgggccggaggaaccgaatgcgctgatcgacgtgtcgcgcgacagcctgcgc
aagcagcccaacgtgcgcgctacggtgcaggaagtcttcgacggcgcgattatcgcctcg
cagaaccgtttcccgtcactgtccttcgatctgagcgccatcaacgatcttctgtcgccg
atgttcgcggccggtttctactacaagacgttcatgtggccgaaggccgcctggcacaag
atttacgaaccgctgatccgccgcgccgccggtctcggcaaggcgccgagcgagccggat
gcggatcattattccggccgttatgcccattgcgacgtgctggtggccggcgctggtgtc
gccggtctcacagctgcgctttctgccgcgaaaactggcgccagcgtcattctggtggat
gagaatgcggacgtcggcggagccctgcgtttcgatgccggcgcggtcatcgacggtctc
gccggttatgaatgggcgcagaaggtttttgccgagctgaagtccctgcccaatgtgcgg
gttctgacgcgcacgaccgcctttggttattacaaccacaattttgtcgcgctcgccgaa
cgcgtcaccgatcatctcgcgacgccggctaaacatcagccgcgcgagcgcctttggcag
gtccgcgccaaaaaggtcgtgctggcggccggtgcgatcgagcgccacatggtcttcgcc
aacaatgaccggcctggcatcatgctggcttcggccgcccgcacctatttgaaccactac
ggcgtcgccgtgggccacaatgtcggtgtctacaccgctcatgattccgcctatgagacc
gccttcgatctgaagaaggccggggtgaagatcgccgccatcgtcgattgccgcgaaaat
ccggaccagcgtctgctggacgaggcccgggcactcggcatcgaggtgctggcgggtcac
agcgtttacaataccgccggccgcctgcgcgtatcttccatgacggtcggccgcaatggc
gggtcgaacaagcgcaagatcgccatcgacgcgcttgttgtctccgccggctggacgcct
tcagtgcatctgttctcgcaatctcgcggcaagctgaagtttgacgcggctaaccagcgt
ttcctgcctgacatccatgtgcagaactgcgtctccatcggcgcctgcaatggcacggat
gatctttcggcgctgatcgccgaggccgcggctgcgggtggcggcgcggtggcgttttcc
ggtgaaaacgcccgggcctggacaggcggcatgattggtgcggcggagggtgcaggcgag
ggcaccggcgtcaaggctttcatcgatttccagcacgatgtctgcgccaaggatattcgc
cttgccgtgcgcgagggcatgcattcggtcgagcatatcaagcgcttcaccaccaatggc
atggcgtccgaccagggcaagatgtcgaacatgcatggccttgccattgcatcggaagcg
ctcggccgggatttgcccaaggtcggcctcaccaccttccgccagccctatacgccggtt
actttcggcacgctcatcaaccattcacgcggcacgctgttcgatcccgcgcgcaagacg
ccgatgcacgacgaagagctggcggctggcgcggtattcgaggatgtcggcaactggaag
cgtgcctggttcttcccgcgggcgggcgaggacatgcatgaagcgatcaaccgtgaatgc
aagacggttcgtgatagcgtcggcatgtttgatgcctccaccctcggcaaaatcgaggtg
gttggcccggatgcggcgaagttcctgaacctcatctacaccaatgcctgggatacgttg
aaacccggccgctgccgttatggcatcatgacccgcgaagacggcttcgtttacgatgac
ggcgttgttgggcgcctggccgaagaccgtttccacgtgacgacgacgacgggcggcgcg
ccgcgcgttctccagcacatggaggactatctccagaccgaattccccgatctcaatgtc
tggctgacatcggcaaccgaacaatgggccgtgattgccgtgcaggggccgaaggcgcgc
gaggttatcgcgcctttcgtcgagggtatcgacctttcgccggaggcctttccgcatatg
gcggtggcggaaggcaagttctgcggcgtgccgacgcggcttttccgcgtctccttcacc
ggcgaactcggtttcgaaatcaatgtgcctgccgattacggcgcagccgtctggtctgca
atccgggagagggcggaagccgtcggcggctgcctctatggtaccgagacaatgcatatc
ctgcgtgccgaaaagggctatatcatcgtcgggcaggatacggatggcaccgtgacgccc
gatgatgccgggcttgcctgggctgtctccaaaaagaaaacggatttcgtcggcattcgc
ggtctgaaacgccccgatctaacgcgctccggccgcaaacagcttgttggcctgaagacg
aaggaccggctgaccgttccggacgagggcggtcagatcgttgccgatccgaaccagcca
aagccaatgaccatgctcggccatgtgacctcggcctattggtcggaaaatctcggccat
tccattgctttcgccttggtggcggatggcagggcgcgcatgggcgaaacgctctatatt
ccgcttgctgataaaaccattgccgtcgaagtgaccgacatggtcttcctcgacaaggaa
ggagcccgtctcaatggctga
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