Roseburia intestinalis XB6B4: RO1_30110
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Entry
RO1_30110 CDS
T02597
Name
(GenBank) Alpha-L-arabinofuranosidase
Organism
rix
Roseburia intestinalis XB6B4
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
Glyco_hydro_43
CBM_6
Motif
Other DBs
NCBI-ProteinID:
CBL13371
UniProt:
D4L181
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Position
3028045..3031905
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AA seq
1286 aa
AA seq
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MDRLNIRTKNRKFETAKDLYGIFFEDINRAGDGGIYPEMIRNRCFEDSLLPEGYTQRADG
VHVVTDSGWEDEFNGGEGLSSWVEEDQIEKTSVPGWYAQDARMRLEQADTLNKNRKAALN
VRFEKGGSIWNIGFCGIPQKKGEAYKFCLFAKTAQETKLEVSVIENNVCFASTTLLLKGN
GYVKYDAVLAATGDSQNAKLIFRCPDGGEILFGFTSLMPGTTYNGHGLRVDLVEKLRDLH
PSFMRFPGGCIVEGSTPSTVMLFRNTVGPVWERPGQQLVWHYRSSNGLGFHEYLQLCEDL
GMEPLYVCNCGMTCQGRKPVLLTGKEQDEILEDTMNALEYALGSPESRWGSLRTQMGHRE
PFGLTYLEIGNENFGPDYEERYRRFYDVVKEKYPHLKVIANAHIEEHACTTEYVDEHFYN
STEFFAENQNYYENYDRKGPKIFVGEQAVNEGAHLGKLYGALGEAAFLIGLEKNQDVVAL
ASYAPLFEHVHYHSWSPNLIRFQNAESFGIPTYYVWKMFGKNRGSYVVESEVESGKIYRP
MEGMASLKSRSVLNYKNAMWNGRKTAVTHEMMGHVMEEEEDGSCCIGHPDEEQIAAMCRK
MPWGDKEKSFVVFGEESDTCGKFDVDIYVEPGSSFEIGIFSARVILSYYDQLLEGAEKIW
TPFGVRPLLWKIEEDHASFWETAIPEEKRLTEDFPLCIEPGRYHHFGYETDGKTVRLFID
RKIVREVEIPSFPAVSSVTTVTEDEIFIKLVNMEGKTDPIEISLDCGVEREYEAVLLTGE
KTAENTFEEPEKVSDKTVKMEGASKKFIYEAPAYSVSVLRLKKKQAFNPYLPSWEYIPDG
EPYVFGDRVYVYGSHDFYNGHVFCLGDYVCWSAPVDNLADWRYEGVIYPKTEDPLNRDGK
MCLYAPDVTVGPDGRYYLYYVLDHVSVVSVAVSDTPAGKYEFYGYVHDKKGDRLGERPGD
EPQFDPGVLTEGARTYLYTGFCGRGDKTRHGAMATVLGPDMITIEEEPVFVAPGGEYADG
TGYEGHAFFEAPSIRKIGNTYYLIYSSSVMHELCYATSEKPTGKFTYRGVLVSNCDMHID
TYKPADMPSAYGGNNHGSIVEISSEWYIFYHRQTNGTWYSRQGCAEKLHLAEDGSFRQVE
LTSCGLNGGSLVGRGEYPAYIACNLFTAEESIFDANQRFPRVMQDGRDGDKEPGYISHIT
DTTTLGFKYFECENVQKVILKVRGYGSGTFEVKTAWDGEVLGTVQIVNSNVWEKYEIQAQ
IPDGKQAIYFTYRGYGNLDLLSFTLE
NT seq
3861 nt
NT seq
+upstream
nt +downstream
nt
atggacagactaaatatcaggaccaaaaacaggaagtttgaaacagcaaaagatttgtat
gggattttctttgaagacatcaaccgggccggagatggtggaatctatccggaaatgata
agaaacagatgctttgaagattcacttcttccggagggatatacgcagcgggcagatgga
gttcatgttgtgacagattccggatgggaagatgaattcaatggcggagaaggactttct
agctgggtagaggaggaccaaattgaaaaaacgtctgtaccggggtggtatgcacaggat
gcgcgcatgcggttagaacaggcggacactttgaacaaaaaccggaaagcggcactgaat
gtacggtttgaaaagggtggaagcatctggaatataggattttgcggtatcccacagaaa
aaaggggaagcatataaattctgtctgtttgcaaaaacagcccaggaaacaaaattggag
gtttctgtcatagaaaataatgtgtgctttgcatccacaacattgctgctgaaagggaat
ggttacgtaaagtacgatgcagtacttgccgcaacaggagacagtcagaatgcgaagctt
atatttcggtgtccggatggtggagagatcctgtttggttttacatctctgatgccggga
acaacctataatggacatggattacgcgtggatctcgttgaaaaactgcgcgatctgcat
ccgagtttcatgaggttcccagggggatgtattgtagagggttcgacgccgtccactgtc
atgctatttcgtaatacagtaggaccggtatgggagagaccggggcagcagttagtatgg
cattaccgcagcagtaacggacttggatttcacgagtatctgcagctttgcgaggatctt
ggaatggaaccattatatgtatgtaattgcggtatgacctgtcagggtaggaagcctgtt
ctcctcacaggaaaagaacaggacgagatactggaagatacaatgaatgctttggaatat
gcgcttggatcgccggagagcagatggggaagcttaagaacacagatgggacacagagag
ccgtttgggttgacttatcttgagattggaaatgagaatttcggaccggattacgaggag
cgctatcgcagattttatgatgtggtgaaggaaaaatatccgcatttgaaggtgattgcg
aatgcgcatatcgaggagcatgcctgcacgacggagtatgtggatgagcatttttataat
tcaaccgagttttttgcagaaaatcagaattattatgaaaactatgacagaaaaggtcca
aagatatttgtcggtgagcaggcggtaaatgaaggtgcacatcttggaaaattatatgga
gcacttggagaggcagcattcctgatcgggctggaaaaaaatcaggatgttgtagcactt
gcatcgtatgctccgttatttgaacatgttcattatcattcctggtcaccgaacctgatc
cggttccaaaatgcagagagctttggaataccgacttattatgtatggaaaatgtttgga
aaaaacagaggatcatatgtagtggagtcagaggtggaatccggtaaaatataccgtccg
atggagggcatggcatctttgaaatccagatctgtcctgaactataaaaatgcaatgtgg
aatggcagaaaaacagcagtgacgcatgaaatgatgggacatgtgatggaagaggaagag
gatggcagctgctgtatcggacatcctgatgaagaacagattgcagcaatgtgccggaaa
atgccatggggagacaaagagaagagctttgttgtattcggggaggaatcagatacctgt
ggaaaatttgatgttgatatttatgtagaaccaggcagcagctttgaaattggcattttc
agtgcaagggtaattttatcttattatgaccagttgttagaaggtgcggaaaaaatatgg
acaccgtttggagtaagacctctgctctggaaaatagaggaggatcatgcatcgttctgg
gaaacagcaattcctgaggagaagagactgacggaagattttccgctttgtatagagcct
ggaagatatcatcattttggatatgagacagatggaaagacggtacggctctttatagac
cggaagatagtacgtgaagtggaaattccatcttttccagcagtatcttctgtaacaaca
gtgacagaggatgaaatttttatcaaacttgttaacatggaaggaaaaacagatcctata
gaaatctctttagactgcggtgtagagcgtgagtatgaggcagttcttctgacaggggaa
aagacagcagagaatacatttgaagaaccggaaaaagtgagtgacaagacggtgaagatg
gagggagcatctaaaaaattcatttatgaagcacctgcttactctgtgagtgtgttaaga
ttgaagaaaaagcaggcatttaacccatatcttccatcgtgggagtatattccggatgga
gagccgtatgtgttcggagacagggtgtatgtatacggatcccatgatttttataacgga
catgtattttgcctgggagattatgtctgctggtcagcaccggttgacaatctcgccgac
tggagatatgaaggagtgatttatcctaaaacagaagatccattgaacagggatggaaag
atgtgcctgtatgccccggatgtgacagtgggaccggatggaagatattatctgtattat
gtgctggaccatgtctctgtcgtatcagttgcagtttctgacacaccggcaggaaaatat
gaattttatggatatgtccatgataaaaagggagacagactcggggaaagaccgggggat
gaaccacagtttgatccgggagtactgacagaaggagcgcgaacctatctgtatacggga
ttttgcggaagaggagacaaaacgagacatggtgcgatggcgacagtgctcggtccggat
atgattaccatcgaggaagaaccggtatttgtggcaccgggaggagagtatgcggatgga
accggatatgagggacatgcattttttgaagcaccatctatccggaagataggaaacaca
tactatctgatttattcgtcttcggtgatgcatgagttatgctatgcaaccagtgagaaa
ccaacgggaaaattcacatataggggtgtgctggtaagcaactgcgatatgcatatagat
acttataaacctgcagatatgccatctgcctatggcggaaacaaccatggaagtatcgtg
gagatttccagtgaatggtatattttttatcacagacagacgaacggaacctggtatagc
agacaggggtgtgcagaaaagcttcatttggcagaagatggaagcttccgccaggtggaa
ctgacatcctgtggattaaatggcggatcactagtgggaaggggggaatacccggcttat
attgcatgcaatctgtttacagcggaggagagcatttttgatgcaaaccagagatttcca
agagtgatgcaggatggaagagacggtgataaggaaccggggtacatttcccatattaca
gataccacaacgctaggctttaaatactttgaatgtgaaaatgtacagaaagtcatcctg
aaagtgagaggatatggaagtgggacgttcgaggttaagacagcctgggatggtgaggtg
cttgggacggttcagattgtaaacagcaatgtgtgggagaaatatgagattcaggcacag
atcccggatggtaagcaggcaatctattttacatatagaggatacggaaatcttgactta
ctgtcattcacacttgagtag
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