Rhizobium johnstonii: RL3771
Help
Entry
RL3771 CDS
T00402
Name
(GenBank) putative GGDEF/EAL sensory box protein
Organism
rle
Rhizobium johnstonii
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS
Motif
Other DBs
NCBI-ProteinID:
CAK09261
RhizoBase:
RL3771
UniProt:
Q1MCR9
LinkDB
All DBs
Position
complement(3973767..3975584)
Genome browser
AA seq
605 aa
AA seq
DB search
MQASKAGTALPEKKATRSEHEFQDLLRRLELALDASRIGVWEHSIEQDGILWDAQMHRLY
ETGETCRLVTASLWSNAIHPDDRERAERDFEQAIATRGAYNSQFRIVLPSGETRHLRSRA
HFYVDAEGLPSFIGAEWDVTADVLLNAELARQKVVAEARALALEESNARIEHVADHDYLT
GLPNRRLLDKRLAELPADKSIATLAVLHLDLDQFKQINDSHGHAAGDVVLRAAALRITAA
IPANGMVARVGGDEFVIVLVNFTDLTELKLITEDVQRRLRKKIRFGQEMLQSGASIGVSW
SGDRRARNLLAESDLALYQAKKLGRNRVEFFTWQLQEDLRSKRRLAEELKLGLERGEILP
YYQVQLDARTREVIGFEALARWKHPEKGVLAPGIFLKIADEHGLAAEIDAAILKSVLKDR
LFWLLRGLAVPRIAVNISASRLADPALLDKLRKLDIPPGVIVFELVETIFLDDSDEKLLA
HIGDIKQMGIDIEIDDFGSGHASLIGLVKLRPKRLKIDRQLVTEVVSSAEQRRVVGSIVE
IAKALDVEVIAEGIETEAHAVVLAQLGCDGLQGYAFGYPAPAAETERLFSSSTSRIEKQK
TAIGN
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcttctaaggctgggaccgcgttgccagagaaaaaagccacacgatccgaacac
gagtttcaggatcttctgcgtcggctcgaactcgctctagatgcatcccggatcggtgtc
tgggagcacagcatcgagcaggacgggatcttgtgggatgcgcagatgcatcgtctctac
gagaccggcgagacctgccggctggtgacggcatcgctttggtcgaatgccatccatccc
gatgatcgcgagcgggccgaacgcgacttcgagcaggcgatcgcgacgcgcggcgcctat
aactcacaattccggatcgtgctgccgagcggcgaaacccgccacctgcgttcgcgcgcg
catttctatgtcgatgcggaaggtcttccctccttcatcggcgccgaatgggatgtgacg
gccgacgtcctgctcaacgcggaactcgcgcggcagaaggtggtggccgaggcaagggcg
ctggcgctcgaggaaagcaatgcgcgcatcgagcatgtcgccgatcacgactatcttacc
ggcttgccgaaccggcgtcttctcgacaagcggctggcggagctgccggccgacaaaagc
atcgccacgcttgcggtcctgcatctcgacctcgaccagttcaagcagatcaacgacagc
cacggtcatgcggcaggcgacgtcgtgctcagggccgcggctcttcgcatcaccgctgcc
attcctgcgaatggcatggtcgcccgtgtcggcggcgatgaattcgtcatcgtgctggtc
aatttcaccgatctcaccgagctgaagctaatcaccgaagacgtccagcgccggctgcgg
aagaagatccgcttcggccaggagatgctgcaatccggcgcctcgatcggcgtttcctgg
agcggcgatcggcgggcgcgcaacctgcttgccgaatccgacctggcactctaccaggcc
aagaagctcgggcgcaaccgcgtcgaattcttcacatggcaattgcaggaggatctgcgc
tccaagcgtcgcctcgctgaagagctgaagctcgggctggagcgcggcgagatccttccc
tattatcaggtgcagctcgacgcccggacgcgggaggtcatcggcttcgaggcgctggcg
cgctggaaacatcccgaaaagggcgtgctcgcccccggcatattcctgaagatcgccgac
gagcacggacttgcggcggagatcgacgcggcgatcctcaaaagcgttctcaaagaccgg
ctgttctggctgttgcgcggccttgcggttccgcgcatcgccgtcaatatctctgcgtcg
cgccttgccgatccggcgctactcgacaagctgaggaaactcgatatcccgcccggcgtg
atcgtcttcgaactggttgagacgattttcctcgacgacagcgacgaaaaactgctcgct
catatcggcgatatcaaacagatgggcatcgacatcgagatcgacgacttcggatcgggc
catgcctcgctcatcggtctcgtcaagctgcggccgaagcggctgaagatcgaccggcag
ctcgtcaccgaggtcgtcagctccgccgagcagcggcgcgtggtgggttctatcgtggaa
atcgccaaggcactcgatgtcgaggtgatcgccgagggcatcgagaccgaggcgcatgcc
gtcgtgctggcgcaactcggctgcgacggcctgcagggttatgcgttcggttatcccgca
ccggcggccgagacagagcgtcttttctcatcgtcgacgagccgaatcgaaaagcagaag
actgcgatcggcaactga
DBGET
integrated database retrieval system
