Rhizobium johnstonii: pRL110560
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Entry
pRL110560 CDS
T00402
Symbol
soxB2
Name
(GenBank) putative sarcosine oxidase subunit
KO
K22084
methylglutamate dehydrogenase subunit A [EC:
1.5.99.5
]
Organism
rle
Rhizobium johnstonii
Pathway
rle00680
Methane metabolism
rle01100
Metabolic pathways
rle01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
rle00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
pRL110560 (soxB2)
Enzymes [BR:
rle01000
]
1. Oxidoreductases
1.5 Acting on the CH-NH group of donors
1.5.99 With unknown physiological acceptors
1.5.99.5 methylglutamate dehydrogenase
pRL110560 (soxB2)
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GFIT
Motif
Pfam:
DAO
FAD_binding_2
Pyr_redox_3
Thi4
NAD_binding_8
Trp_halogenase
Pyr_redox_2
HI0933_like
FAD_binding_3
NAD_binding_9
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
CAK03513
RhizoBase:
pRL110560
UniProt:
Q1M5H6
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Position
pRL11:603973..605223
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AA seq
416 aa
AA seq
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MRYSALSIFLNGLRGNKGWAPAWRDPAPKPHYDVVIVGGGGHGLATAYYLAKEFGVTNVA
VLEKGYLGSGNIGRNTTIIRSNYLLPGNNPFYELSMKLWEGLEQDFNFNAMVSQRGVLNL
FHSDAQRDAYTRRGNAMRLHGVDAELLDREAVRRKLPFLGFDNARFPIMGGLFQPRGGTV
RHDAVAWGYARGADSRGVDIITQCEVTGIRRENGEVTGVETSKGFIGCGKLALAAAGNST
VVADMAGLRLPIESHVLQAFVSEGLKPFIDTVVTFGAGHFYASQSDKGGLVFGGDIDGYN
SYAQRGNLACVEHVAEAGLALIPSLSRVRYLRSWGGVMDMSMDGSPIIDRTHIDNLYLNT
GWCYGGFKATPASGFCYAHLIARDTPHQTARAFRLDRFARGYPIDEKGVGAQPNLH
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattccgctctttcgattttcctgaacggccttcgtggcaacaaaggctgggcg
ccggcctggcgcgacccggccccaaagccgcattacgacgtcgtcatcgttggtggcggc
ggccatggtcttgccaccgcctattatcttgccaaggaattcggcgtcaccaatgtcgcc
gtcctcgaaaagggctacctcggctccggcaatatcggcaggaacacgacgatcatccgc
tcgaactacctgctgccgggcaataatcccttctacgagctgtcgatgaagctttgggag
gggctggagcaggacttcaacttcaacgccatggtctcgcagcgcggcgtgctcaacctc
ttccattccgacgcccagcgcgacgcctatacgcgccgcggcaatgccatgcggctgcac
ggggtggacgccgagcttctcgaccgcgaggcggtgcgcaggaaattgccctttctcggc
ttcgacaatgcccgtttcccgatcatgggcggcctgttccagccgcgcggcggcacggtg
cgccatgatgcggtcgcctggggttatgcgcgcggcgcagacagccgcggcgtcgacatc
attacccagtgcgaggtgaccggcatccgccgcgaaaacggtgaggtgaccggcgttgag
accagtaagggcttcatcggctgcggcaagctggcgcttgctgccgccggcaactccacc
gtcgtcgccgatatggccggccttcgcctaccgatcgaaagccatgtgctgcaggccttc
gtttcggaagggctaaaaccgttcatcgacacggtcgtcaccttcggcgccgggcatttc
tacgcgtcccagtcggacaagggcggcctcgtcttcggcggtgacatcgacggctacaat
tcctatgcccagcgcggcaatctcgcttgcgtcgagcatgtcgccgaagccgggctggcg
ctgatcccgtcgctgtcgcgcgtgcggtatctgcgctcctggggcggcgtcatggatatg
agcatggacggctcgccgatcatcgaccgcacccatatcgacaatctctatctcaacacc
ggctggtgttacggcggcttcaaggccacgcccgcctccggcttctgctacgcccatctg
atcgcccgcgatacgccgcatcagaccgcccgcgccttccggctcgaccgcttcgcgcgc
ggctatccgatcgacgaaaagggcgtcggcgcccagcccaatctgcactga
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