Rhizobium leguminosarum bv. trifolii WSM1325: Rleg_3860
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Entry
Rleg_3860 CDS
T00926
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
rlg
Rhizobium leguminosarum bv. trifolii WSM1325
Pathway
rlg00300
Lysine biosynthesis
rlg00470
D-Amino acid metabolism
rlg01100
Metabolic pathways
rlg01110
Biosynthesis of secondary metabolites
rlg01120
Microbial metabolism in diverse environments
rlg01230
Biosynthesis of amino acids
Module
rlg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
rlg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rleg_3860
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Rleg_3860
Enzymes [BR:
rlg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Rleg_3860
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ACS58103
UniProt:
C6AXH9
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All DBs
Position
3930727..3931995
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AA seq
422 aa
AA seq
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MNHFEYRDGVLHAENVPVPEIAKAVGTPFYVYSTATLERHYRVFSEAFADMDSMVCYAMK
ANSNQAVLKTLGRLGAGIDVVSEGELRRALAADIPASRIMFSGVGKTPSEMDFALEAGIY
CFNVESEPELEILNQRAVSAGKKAPVSFRINPDVDAKTHSKISTGKKENKFGISWERARA
IYAHAAKLPGIEVTGIDMHIGSQITELQPFDDAFKLLHDLVATLRADGHTIHHVDIGGGL
GIPYKDDNNPPPLPDAYAAIVKNQLRGLNCKIITEPGRLIVGNAGILVTEVLYVKDGGEK
TFVIVDGAMNDLIRPTLYEAYHEIRPVTISAANAPRIRADVVGPVCETGDYLALDREMAM
PKPGDLMAVSTAGAYGAVQAGTYNSRLLVPEVLVRGSDFHTIRPRRTYAELISLDSVPAW
LD
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
gtgaaccatttcgagtaccgcgacggcgtccttcatgcggagaacgtccccgttcccgag
atcgccaaggcggtcggcacccctttctacgtctactccaccgcgacgctggagcgccat
taccgcgtcttttcggaagccttcgccgacatggactccatggtctgctatgcgatgaag
gcgaattcgaaccaggcggtgctgaagacgctgggccgcctcggcgccggcatcgatgtc
gtctctgagggcgaactgcgccgcgcgcttgccgccgacattccagcgagccgcatcatg
ttctcaggtgtcggcaagacgccgtccgagatggatttcgccctcgaagccggtatctac
tgtttcaacgtcgaatccgagcccgagctcgagatcctcaatcagcgcgccgtcagcgcg
ggcaagaaagcgccggtctccttccgcatcaaccctgatgtcgatgcgaagacgcattcc
aagatctcgaccggcaagaaggaaaacaagttcggcatctcctgggagcgcgcccgcgcc
atctatgcccatgccgccaagctgccgggcatcgaggtcaccggcatcgacatgcatatc
ggcagccagatcaccgaattgcagcccttcgacgacgccttcaagctgctgcacgacctt
gtcgcgacgctgcgcgccgacggccacaccatccatcacgtcgatatcggcggcggcctc
ggtatcccctacaaggacgacaacaatccgccgccgctgccggacgcctatgcggcaatc
gtcaagaaccagctgcgcggtctaaactgcaagatcatcaccgaacccggacgcctgatc
gtcggcaatgccggcatcctcgtgaccgaggtcctctatgtgaaggatggcggcgaaaag
accttcgtcatcgtcgacggcgcgatgaacgatctcatccgcccgacgctttacgaggcc
tatcacgagattcggccggtaacgatttcggcggccaacgcgccgcgcatccgcgccgat
gtcgtcggccccgtttgcgagaccggcgactatctggcgctcgaccgcgagatggcgatg
ccgaagcccggcgacctgatggccgtcagcaccgccggcgcctacggcgcagtccaggcc
ggcacctataacagccggctgctggtgcccgaagttctggtcaggggcagcgatttccac
acgattcgaccgcgtagaacctatgccgaactgatcagcctcgactccgttccggcctgg
ctcgactga
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